8PC2 | pdb_00008pc2

SelDeg51 in complex with FKBP51FK1 domain and pVHL:EloB:EloC


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth B]SCOP2B SuperfamilyVHL 8041313 3000841 SCOP2B (2022-06-29)
E [auth A]SCOP2B SuperfamilyVHL 8041313 3000841 SCOP2B (2022-06-29)
C [auth D]SCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)
G [auth F]SCOP2B SuperfamilyUbiquitin-like 8038575 3000157 SCOP2B (2022-06-29)
D [auth G]SCOP2B SuperfamilyRotamase-like 8042824 3000622 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyRotamase-like 8042824 3000622 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth B],
E [auth A]
PF17211VHL box domain (VHL_C)VHL box domainThis domain represents the short C-terminal alpha helical domain from the VHL protein [1]. Domain
A [auth B],
E [auth A]
PF01847VHL beta domain (VHL)VHL beta domainVHL forms a ternary complex with the elonginB Swiss:O44226 and elonginC Swiss:O13292 proteins. This complex binds Cul2, which then is involved in regulation of vascular endothelial growth factor Swiss:P15692 mRNA. Domain
B [auth C],
F [auth E]
PF03931Skp1 family, tetramerisation domain (Skp1_POZ)Skp1 family, tetramerisation domainDomain
C [auth D],
G [auth F]
PF00240Ubiquitin family (ubiquitin)Ubiquitin familyThis family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ...This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry a distinctive five-residue motif termed the proteasome-interacting motif (PIM), which may have a biologically significant role in protein delivery to proteasomes and recruitment of proteasomes to transcription sites [5].
Domain
D [auth G],
H
PF00254FKBP-type peptidyl-prolyl cis-trans isomerase (FKBP_C)FKBP-type peptidyl-prolyl cis-trans isomeraseDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth B],
E [auth A]
von Hippel-Lindau disease tumor suppressor
B [auth C],
F [auth E]
Elongin-C
C [auth D],
G [auth F]
Elongin-B
D [auth G],
H
Peptidyl-prolyl cis-trans isomerase FKBP5

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A [auth B],
E [auth A]
PharosP40337
B [auth C],
F [auth E]
PharosQ15369
C [auth D],
G [auth F]
PharosQ15370
D [auth G],
H
PharosQ13451