8PV2 | pdb_00008pv2

Chaetomium thermophilum pre-60S State 10 - pre-5S rotation with Ytm1-Erb1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
F [auth CK]SCOP2B Superfamily50S Ribosomal protein L14-like 8053081 3000433 SCOP2B (2022-06-29)
H [auth CN]SCOP2B SuperfamilyPentein 8084662 3000640 SCOP2B (2022-06-29)
R [auth LB]SCOP2B SuperfamilyTranslational proteins 8106162 3000811 SCOP2B (2022-06-29)
S [auth LC]SCOP2B SuperfamilyRibosomal protein L4 8077111 3001146 SCOP2B (2022-06-29)
T [auth LD]SCOP2B SuperfamilyTranslational machinery components 8106194 3000571 SCOP2B (2022-06-29)
CA [auth LN]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8106168 3000210 SCOP2B (2022-06-29)
KA [auth LV]SCOP2B Superfamily50S Ribosomal protein L14-like 8106208 3000433 SCOP2B (2022-06-29)
PA [auth Lc]SCOP2B SuperfamilyL30e-like 8106196 3001739 SCOP2B (2022-06-29)
SA [auth Lf]SCOP2B SuperfamilyTranslational proteins 8106190 3000811 SCOP2B (2022-06-29)
TA [auth Lg]SCOP2B SuperfamilyRibosomal protein L34e-like 8106200 3002203 SCOP2B (2022-06-29)
YA [auth Ll]SCOP2B SuperfamilyRibosomal protein L39e 8106282 3001756 SCOP2B (2022-06-29)
Y [auth LJ]SCOP2B SuperfamilyRL5-like 8077505 3001709 SCOP2B (2022-06-29)
GA [auth LR]SCOP2B SuperfamilyRibosomal protein L19 (L19e) 8106186 3000890 SCOP2B (2022-06-29)
JA [auth LU]SCOP2B Superfamily60S Ribosomal protein L22e 8106192 3002158 SCOP2B (2022-06-29)
MA [auth LY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8106166 3000334 SCOP2B (2022-06-29)
RA [auth Le]SCOP2B SuperfamilyRibosomal protein L32e 8106182 3000982 SCOP2B (2022-06-29)
XA [auth Lk]SCOP2B SuperfamilyRibosomal L38e protein-like 8106202 3002206 SCOP2B (2022-06-29)
ZA [auth Lp]SCOP2B SuperfamilyZn-binding ribosomal proteins 8106178 3001320 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
E [auth CH]PF08155NOGCT (NUC087) domain (NOGCT)NOGCT (NUC087) domainThis C terminal domain is found in the NOG subfamily of nucleolar GTP-binding proteins [1]. Domain
E [auth CH]PF17835NOG1 N-terminal helical domain (NOG1_N)NOG1 N-terminal helical domainThis domain is found at the N-terminus of NOG1 GTPase proteins. Domain
E [auth CH]PF06858Nucleolar GTP-binding protein 1 (NOG1) (NOG1)Nucleolar GTP-binding protein 1 (NOG1)- Family
E [auth CH]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
F [auth CK]PF01201Ribosomal protein S8e (Ribosomal_S8e)Ribosomal protein S8e- Family
H [auth CN]PF01912eIF-6 family (eIF-6)eIF-6 family- Family
J [auth CQ]PF01246Ribosomal protein L24e (Ribosomal_L24e)Ribosomal protein L24eDomain
S [auth LC]PF1437460S ribosomal protein L4 C-terminal domain (Ribos_L4_asso_C)60S ribosomal protein L4 C-terminal domainThis family is found at the very C-terminal of 60 ribosomal L4 proteins. Domain
S [auth LC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
T [auth LD]PF17144Ribosomal large subunit proteins 60S L5, and 50S L18 (Ribosomal_L5e)Ribosomal large subunit proteins 60S L5, and 50S L18- Family
T [auth LD]PF01198Ribosomal protein L31e (Ribosomal_L31e)Ribosomal protein L31e- Family
T [auth LD]PF14204Ribosomal L18 C-terminal region (Ribosomal_L18_c)Ribosomal L18 C-terminal regionThis domain is the C-terminal end of ribosomal L18/L5 proteins. Domain
U [auth LE]PF01655Ribosomal protein L32 (Ribosomal_L32e)Ribosomal protein L32- Family
U [auth LE]PF01159Ribosomal protein L6e (Ribosomal_L6e)Ribosomal protein L6e- Family
X [auth LH]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
BA [auth LM]PF01929Ribosomal protein L14 (Ribosomal_L14e)Ribosomal protein L14- Family
CA [auth LN]PF00827Ribosomal L15 (Ribosomal_L15e)Ribosomal L15- Family
FA [auth LQ]PF01778Ribosomal L28e protein family (Ribosomal_L28e)Ribosomal L28e protein family- Family
FA [auth LQ]PF17135Ribosomal protein 60S L18 and 50S L18e (Ribosomal_L18)Ribosomal protein 60S L18 and 50S L18e- Family
KA [auth LV]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
LA [auth LX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
NA [auth LZ]PF01777Ribosomal L27e protein family (Ribosomal_L27e)Ribosomal L27e protein family- Family
BB [auth CC]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
DB [auth CJ]PF06732Pescadillo N-terminus (Pescadillo_N)Pescadillo N-terminus- Family
DB [auth CJ]PF00533BRCA1 C Terminus (BRCT) domain (BRCT)BRCA1 C Terminus (BRCT) domainThe BRCT domain is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage. The BRCT domain of XRCC1 forms a homodimer in the crystal structure. This suggests that pairs of BRCT domains associate as homo- ...The BRCT domain is found predominantly in proteins involved in cell cycle checkpoint functions responsive to DNA damage. The BRCT domain of XRCC1 forms a homodimer in the crystal structure. This suggests that pairs of BRCT domains associate as homo- or heterodimers. BRCT domains are often found as tandem-repeat pairs [2]. Structures of the BRCA1 BRCT domains revealed a basis for a widely utilised head-to-tail BRCT-BRCT oligomerisation mode [3]. This conserved tandem BRCT architecture facilitates formation of the canonical BRCT phospho-peptide interaction cleft at a groove between the BRCT domains. Disease associated missense and nonsense mutations in the BRCA1 BRCT domains disrupt peptide binding by directly occluding this peptide binding groove, or by disrupting key conserved BRCT core folding determinants [5].
Domain
Q [auth LA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
EB [auth CM],
V [auth LF]
PF08079Ribosomal L30 N-terminal domain (Ribosomal_L30_N)Ribosomal L30 N-terminal domainThis presumed domain is found at the N-terminus of Ribosomal L30 proteins and has been termed RL30NT or NUC018 [1]. Domain
EB [auth CM],
V [auth LF]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
EB [auth CM],
V [auth LF]
PF01247Ribosomal protein L35Ae (Ribosomal_L35Ae)Ribosomal protein L35AeDomain
W [auth LG]PF01248Ribosomal protein L7Ae/L30e/S12e/Gadd45 family (Ribosomal_L7Ae)Ribosomal protein L7Ae/L30e/S12e/Gadd45 familyThis family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD11 ...This family includes: Ribosomal L7A from metazoa, Ribosomal L8-A and L8-B from fungi, 30S ribosomal protein HS6 from archaebacteria, 40S ribosomal protein S12 from eukaryotes, Ribosomal protein L30 from eukaryotes and archaebacteria. Gadd45 and MyD118 [1].
Domain
Y [auth LJ]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
Y [auth LJ]PF01907Ribosomal protein L37e (Ribosomal_L37e)Ribosomal protein L37e- Family
Y [auth LJ]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
Z [auth LK]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. Domain
Z [auth LK]PF01781Ribosomal L38e protein family (Ribosomal_L38e)Ribosomal L38e protein family- Family
Z [auth LK]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domainDomain
AA [auth LL]PF00832Ribosomal L39 protein (Ribosomal_L39)Ribosomal L39 protein- Family
DA [auth LO]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
EA [auth LP]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
EA [auth LP]PF01780Ribosomal L37ae protein family (Ribosomal_L37ae)Ribosomal L37ae protein family- Family
GA [auth LR]PF01280Ribosomal protein L19e, N-terminal domain (Ribosomal_L19e)Ribosomal protein L19e, N-terminal domainThis domain is found at the N-terminal end of the large ribosomal subunit protein eL19 found in eukaryotes and archaea. This is an helical domain that assumes an orthogonal bundle topology. Domain
HA [auth LS]PF01775Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A (Ribosomal_L18A)Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18AThis family includes: archaeal 50S ribosomal protein L18Ae, often referred to as L20e or LX; fungal 60S ribosomal protein L20; and higher eukaryote 60S ribosomal protein L18A. Domain
JA [auth LU]PF01776Ribosomal L22e protein family (Ribosomal_L22e)Ribosomal L22e protein family- Family
MA [auth LY]PF16906Ribosomal proteins L26 eukaryotic, L24P archaeal (Ribosomal_L26)Ribosomal proteins L26 eukaryotic, L24P archaeal- Family
MA [auth LY]PF00467KOW motif (KOW)KOW motif- Family
D [auth CF]PF17777Insertion domain in 60S ribosomal protein L10P (RL10P_insert)Insertion domain in 60S ribosomal protein L10PThis domain is found in prokaryotic and archaeal ribosomal L10 protein [1]. Domain
D [auth CF]PF04427Brix domain (Brix)Brix domainDomain
D [auth CF]PF00466Ribosomal protein L10 (Ribosomal_L10)Ribosomal protein L10- Family
CB [auth CD]PF08153NGP1NT (NUC091) domain (NGP1NT)NGP1NT (NUC091) domainThis N terminal domain is found in a subfamily of hypothetical nucleolar GTP-binding proteins similar to human NGP1 [1]. Domain
CB [auth CD]PF08154NLE (NUC135) domain (NLE)NLE (NUC135) domainThis domain is located N terminal to WD40 repeats. It is found in the microtubule-associated protein Swiss:Q12024 [1]. Domain
CB [auth CD]PF0192650S ribosome-binding GTPase (MMR_HSR1)50S ribosome-binding GTPase- Family
CB [auth CD]PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
G [auth CL]PF08701GNL3L/Grn1 putative GTPase (GN3L_Grn1)GNL3L/Grn1 putative GTPase- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
E [auth CH]Nucleolar GTP-binding protein 1
F [auth CK]Ribosome biogenesis protein NSA2 homolog-
H [auth CN]Eukaryotic translation initiation factor 6
J [auth CQ]Ribosome biogenesis protein RLP24
M [auth Cf]Ribosome production factor 2 homolog
N [auth Cg]Ribosome biogenesis regulatory protein-
P [auth Cz]rRNA-processing protein-
R [auth LB]60S ribosomal protein L3-like protein
S [auth LC]60S ribosomal protein L4-like protein
T [auth LD]60S ribosomal protein l5-like protein
U [auth LE]60S ribosomal protein L6
X [auth LH]60S ribosomal protein l9-like protein---
BA [auth LM]60S ribosomal protein L14-like protein
CA [auth LN]Ribosomal protein L15
FA [auth LQ]Ribosomal protein L18-like protein
KA [auth LV]60S ribosomal protein l23-like protein
LA [auth LX]60S ribosomal protein L25-like protein
NA [auth LZ]60S ribosomal protein L27
PA [auth Lc]60S ribosomal protein l30-like protein -
QA [auth Ld]Putative 60S ribosomal protein
SA [auth Lf]60S ribosomal protein l33-like protein
TA [auth Lg]Ribosomal protein l34-like protein
VA [auth Li]60S ribosomal protein L36
WA [auth Lj]Ribosomal protein L37
YA [auth Ll]Ribosomal protein eL39
BB [auth CC]Ribosome biogenesis protein ERB1
DB [auth CJ]Pescadillo homolog
A [auth C1]26S rRNA---
K [auth Cb]Zinc finger domain-containing protein
L [auth Cd]Nucleolar GTP-binding protein 2 -
O [auth Ch]Ribosome assembly protein 4-
Q [auth LA]60S ribosomal protein L2-like protein
B [auth C2]5.8S rRNA---
EB [auth CM],
V [auth LF]
60S ribosomal protein l7-like protein
W [auth LG]60S ribosomal protein L8
Y [auth LJ]Putative ribosomal protein
Z [auth LK]60S ribosomal protein L12-like protein
AA [auth LL]60S ribosomal protein L13
C [auth C4]5S rRNA---
DA [auth LO]60S ribosomal protein L16-like protein
EA [auth LP]60S ribosomal protein l17-like protein
GA [auth LR]Ribosomal protein L19
HA [auth LS]60S ribosomal protein L20
IA [auth LT]60S ribosomal protein l21-like protein
JA [auth LU]60S ribosomal protein L22-like protein
MA [auth LY]60S ribosomal protein L26-like protein
D [auth CF]Large ribosomal subunit protein uL10
OA [auth La]60S ribosomal protein L28-like protein---
RA [auth Le]60S ribosomal protein L32-like protein
UA [auth Lh]dolichyl-diphosphooligosaccharide--protein glycotransferase
XA [auth Lk]60S ribosomal protein L38-like protein
ZA [auth Lp]60S ribosomal protein L43-like protein
AB [auth Lq]Putative 60S ribosomal protein
CB [auth CD]Ribosome biogenesis protein YTM1
G [auth CL]Putative GTP binding protein -
I [auth CO]DUF2423 domain-containing protein- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
E [auth CH]IPR024926Nucleolar GTP-binding protein 1Family
E [auth CH]IPR031167OBG-type guanine nucleotide-binding (G) domainDomain
E [auth CH]IPR012973NOG, C-terminalDomain
E [auth CH]IPR041623NOG1, N-terminal helical domainDomain
E [auth CH]IPR006073GTP binding domainDomain
E [auth CH]IPR010674Nucleolar GTP-binding protein 1, Rossman-fold domainDomain
E [auth CH]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth CK]IPR039411Ribosomal biogenesis NSA2 familyFamily
F [auth CK]IPR022309Ribosomal protein eS8/ribosomal biogenesis NSA2Family
H [auth CN]IPR002769Translation initiation factor IF6Family
J [auth CQ]IPR011017TRASH domainDomain
J [auth CQ]IPR056366Large ribosomal subunit protein eL24Family
J [auth CQ]IPR000988Large ribosomal subunit protein eL24-related, N-terminalDomain
J [auth CQ]IPR038630Ribosomal protein L24e/L24 superfamilyHomologous Superfamily
M [auth Cf]IPR039770Ribosome biogenesis protein Rpf2Family
M [auth Cf]IPR007109Brix domainDomain
N [auth Cg]IPR007023Ribosomal biogenesis regulatory proteinFamily
P [auth Cz]IPR005579Cgr1-likeFamily
R [auth LB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
R [auth LB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
R [auth LB]IPR045077Large ribosomal subunit protein uL3, archaeal/eukaryotic-typeFamily
R [auth LB]IPR044892Ribosomal protein L3, domain 3, archaeal-type superfamilyHomologous Superfamily
R [auth LB]IPR000597Large ribosomal subunit protein uL3Family
S [auth LC]IPR025755Large ribosomal subunit protein uL4, C-terminal domainDomain
S [auth LC]IPR002136Large ribosomal subunit protein uL4Family
S [auth LC]IPR013000Large ribosomal subunit protein uL4, eukaryotic/archaeal, conserved siteConserved Site
S [auth LC]IPR045240Large ribosomal subunit protein uL4, eukaryotic and archaeal typeFamily
S [auth LC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
T [auth LD]IPR005485Large ribosomal subunit protein uL18, eukaryotic/archaealFamily
T [auth LD]IPR025607Large ribosomal subunit protein uL18, C-terminal, eukaryotesDomain
U [auth LE]IPR049633Large ribosomal subunit protein eL6, conserved siteConserved Site
U [auth LE]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
U [auth LE]IPR041997Large ribosomal subunit protein eL6, KOW domainDomain
U [auth LE]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth LE]IPR000915Large ribosomal subunit protein eL6Family
BA [auth LM]IPR039660Large ribosomal subunit protein eL14Family
BA [auth LM]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
BA [auth LM]IPR002784Large ribosomal subunit protein eL14 domainDomain
BA [auth LM]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth LN]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
CA [auth LN]IPR020925Large ribosomal subunit protein eL15, conserved siteConserved Site
CA [auth LN]IPR024794Large ribosomal subunit protein eL15 core domain superfamilyHomologous Superfamily
CA [auth LN]IPR000439Large ribosomal subunit protein eL15Family
FA [auth LQ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
FA [auth LQ]IPR021132Large ribosomal subunit protein eL18, conserved siteConserved Site
FA [auth LQ]IPR000039Large ribosomal subunit protein eL18Family
FA [auth LQ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
KA [auth LV]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
KA [auth LV]IPR000218Large ribosomal subunit protein uL14Family
KA [auth LV]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
LA [auth LX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
LA [auth LX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
LA [auth LX]IPR005633Large ribosomal subunit protein uL23, N-terminalDomain
LA [auth LX]IPR013025Large ribosomal subunit protein uL23-likeFamily
NA [auth LZ]IPR018262Large ribosomal subunit protein eL27, conserved siteConserved Site
NA [auth LZ]IPR038655Large ribosomal subunit protein eL27 superfamilyHomologous Superfamily
NA [auth LZ]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth LZ]IPR001141Large ribosomal subunit protein eL27Family
NA [auth LZ]IPR041991Large ribosomal subunit protein eL27, KOW domainDomain
PA [auth Lc]IPR022991Large ribosomal subunit protein eL30, conserved siteConserved Site
PA [auth Lc]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
PA [auth Lc]IPR000231Large ribosomal subunit protein eL30Family
PA [auth Lc]IPR039109Large ribosomal subunit protein eL30-likeFamily
PA [auth Lc]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
QA [auth Ld]IPR020052Large ribosomal subunit protein eL31, conserved siteConserved Site
QA [auth Ld]IPR023621Large ribosomal subunit protein eL31 domain superfamilyHomologous Superfamily
QA [auth Ld]IPR000054Large ribosomal subunit protein eL31Family
SA [auth Lf]IPR038661Large ribosomal subunit protein eL33 superfamilyHomologous Superfamily
SA [auth Lf]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
SA [auth Lf]IPR001780Large ribosomal subunit protein eL33Family
SA [auth Lf]IPR018266Large ribosomal subunit protein eL33, conserved siteConserved Site
TA [auth Lg]IPR008195Large ribosomal subunit protein eL34Family
TA [auth Lg]IPR038562Large ribosomal subunit protein eL34, C-terminal domain superfamilyHomologous Superfamily
TA [auth Lg]IPR018065Large ribosomal subunit protein eL34, conserved siteConserved Site
VA [auth Li]IPR000509Large ribosomal subunit protein eL36Family
VA [auth Li]IPR038097Large ribosomal subunit protein eL36 domain superfamilyHomologous Superfamily
WA [auth Lj]IPR001569Large ribosomal subunit protein eL37Family
WA [auth Lj]IPR018267Large ribosomal subunit protein eL37, conserved siteConserved Site
WA [auth Lj]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
WA [auth Lj]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
YA [auth Ll]IPR023626Large ribosomal subunit protein eL39 domain superfamilyHomologous Superfamily
YA [auth Ll]IPR000077Large ribosomal subunit protein eL39Family
BB [auth CC]IPR001680WD40 repeatRepeat
BB [auth CC]IPR019775WD40 repeat, conserved siteConserved Site
BB [auth CC]IPR012953BOP1, N-terminal domainDomain
BB [auth CC]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
BB [auth CC]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
BB [auth CC]IPR028598WD repeat BOP1/Erb1Family
DB [auth CJ]IPR001357BRCT domainDomain
DB [auth CJ]IPR010613PescadilloFamily
DB [auth CJ]IPR036420BRCT domain superfamilyHomologous Superfamily
K [auth Cb]IPR003604Matrin/U1-C-like, C2H2-type zinc fingerDomain
K [auth Cb]IPR051879C2H2-type Zinc Finger Maturation ProteinFamily
K [auth Cb]IPR013087Zinc finger C2H2-typeDomain
K [auth Cb]IPR036236Zinc finger C2H2 superfamilyHomologous Superfamily
K [auth Cb]IPR022755Zinc finger, double-stranded RNA bindingDomain
L [auth Cd]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
L [auth Cd]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
L [auth Cd]IPR024929Nucleolar GTP-binding protein 2, circularly permuted GTPase motifDomain
L [auth Cd]IPR006073GTP binding domainDomain
L [auth Cd]IPR012971Nucleolar GTP-binding protein 2, N-terminal domainDomain
L [auth Cd]IPR023179GTP-binding protein, orthogonal bundle domain superfamilyHomologous Superfamily
L [auth Cd]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
O [auth Ch]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
O [auth Ch]IPR001680WD40 repeatRepeat
O [auth Ch]IPR019775WD40 repeat, conserved siteConserved Site
O [auth Ch]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
O [auth Ch]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
Q [auth LA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
Q [auth LA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
Q [auth LA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth LA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
Q [auth LA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
Q [auth LA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth LA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
Q [auth LA]IPR002171Large ribosomal subunit protein uL2Family
EB [auth CM],
V [auth LF]
IPR035808Large ribosomal subunit protein uL30, eukaryotic/archaealDomain
EB [auth CM],
V [auth LF]
IPR012988Large ribosomal subunit protein uL30, N-terminal, eukaryotesDomain
EB [auth CM],
V [auth LF]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
EB [auth CM],
V [auth LF]
IPR039699Large ribosomal subunit protein uL30Family
EB [auth CM],
V [auth LF]
IPR005998Large ribosomal subunit protein uL30, eukaryoticFamily
EB [auth CM],
V [auth LF]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
W [auth LG]IPR050257Large ribosomal subunit protein eL8/uL1-likeFamily
W [auth LG]IPR004038Ribosomal protein eL8/eL30/eS12/Gadd45Domain
W [auth LG]IPR004037Large ribosomal subunit protein eL8-like, conserved siteConserved Site
W [auth LG]IPR029064Ribosomal protein eL30-like superfamilyHomologous Superfamily
W [auth LG]IPR018492Ribosomal protein eL8/Nhp2 familyFamily
W [auth LG]IPR001921Large ribosomal subunit protein eL8, eukaryotaFamily
Y [auth LJ]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
Y [auth LJ]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
Y [auth LJ]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
Y [auth LJ]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
Y [auth LJ]IPR002132Large ribosomal subunit protein uL5Family
Z [auth LK]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
Z [auth LK]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
Z [auth LK]IPR000911Ribosomal protein uL11Family
Z [auth LK]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
Z [auth LK]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
Z [auth LK]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily
AA [auth LL]IPR001380Large ribosomal subunit protein eL13Family
AA [auth LL]IPR018256Large ribosomal subunit protein eL13, conserved siteConserved Site
DA [auth LO]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
DA [auth LO]IPR005822Large ribosomal subunit protein uL13Family
DA [auth LO]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
DA [auth LO]IPR005755Large ribosomal subunit protein uL13, eukaryotic/archaealFamily
EA [auth LP]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
EA [auth LP]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
EA [auth LP]IPR001063Large ribosomal subunit protein uL22Family
EA [auth LP]IPR005721Large ribosomal subunit protein uL22, eukaryotic/archaealFamily
GA [auth LR]IPR056809GCN1-like, HEAT repeatsDomain
GA [auth LR]IPR016024Armadillo-type foldHomologous Superfamily
GA [auth LR]IPR023638Large ribosomal subunit protein eL19, conserved siteConserved Site
GA [auth LR]IPR004155PBS lyase HEAT-like repeatRepeat
GA [auth LR]IPR034085TOG domainDomain
GA [auth LR]IPR019399Parkin co-regulated proteinFamily
GA [auth LR]IPR033935Large ribosomal subunit protein eL19, eukaryoticDomain
GA [auth LR]IPR021133HEAT, type 2Repeat
GA [auth LR]IPR015972Large ribosomal subunit protein eL19, domain 1Homologous Superfamily
GA [auth LR]IPR011989Armadillo-like helicalHomologous Superfamily
GA [auth LR]IPR022716Gcn1, N-terminalDomain
GA [auth LR]IPR035970Large ribosomal subunit protein eL19 superfamilyHomologous Superfamily
GA [auth LR]IPR000196Large ribosomal subunit protein eL19 domainDomain
GA [auth LR]IPR056810Stalled ribosome sensor GCN1-like, N-terminalDomain
HA [auth LS]IPR028877Large ribosomal subunit protein eL20Family
HA [auth LS]IPR023573Large ribosomal subunit protein eL20 domainDomain
HA [auth LS]IPR021138Large ribosomal subunit protein eL20, eukaryotesFamily
IA [auth LT]IPR018259Large ribosomal subunit protein eL21, conserved siteConserved Site
IA [auth LT]IPR036948Large ribosomal subunit protein eL21 superfamilyHomologous Superfamily
IA [auth LT]IPR001147Large ribosomal subunit protein eL21Family
IA [auth LT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
JA [auth LU]IPR002671Large ribosomal subunit protein eL22Family
JA [auth LU]IPR038526Large ribosomal subunit protein eL22 superfamilyHomologous Superfamily
MA [auth LY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
MA [auth LY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
MA [auth LY]IPR005824KOWDomain
MA [auth LY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
MA [auth LY]IPR005756Large ribosomal subunit protein uL24, eukaryotic/archaealFamily
D [auth CF]IPR043141Large ribosomal subunit protein uL10-like domain superfamilyHomologous Superfamily
D [auth CF]IPR001790Large ribosomal subunit protein uL10Family
D [auth CF]IPR043164Large ribosomal subunit protein uL10-like, insertion domain superfamilyHomologous Superfamily
D [auth CF]IPR051742Ribosomal Assembly Factor uL10Family
D [auth CF]IPR040637Large ribosomal subunit protein uL10-like, insertion domainDomain
D [auth CF]IPR033867Ribosome assembly factor Mrt4Family
RA [auth Le]IPR036351Large ribosomal subunit protein eL32 superfamilyHomologous Superfamily
RA [auth Le]IPR001515Large ribosomal subunit protein eL32Family
UA [auth Lh]IPR003674Oligosaccharyl transferase, STT3 subunitFamily
UA [auth Lh]IPR048307Oligosaccharyl transferase STT3, N-terminal domainDomain
UA [auth Lh]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
UA [auth Lh]IPR001854Large ribosomal subunit protein uL29Family
UA [auth Lh]IPR048999STT3/PglB/AglB, core domainDomain
XA [auth Lk]IPR002675Large ribosomal subunit protein eL38Family
XA [auth Lk]IPR038464Large ribosomal subunit protein eL38 superfamilyHomologous Superfamily
ZA [auth Lp]IPR002674Large ribosomal subunit protein eL43Family
ZA [auth Lp]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
ZA [auth Lp]IPR011331Large ribosomal subunit protein eL37/eL43Homologous Superfamily
ZA [auth Lp]IPR050522Eukaryotic ribosomal protein eL43Family
AB [auth Lq]IPR029004Ribosomal eL28/Mak16Domain
AB [auth Lq]IPR002672Large ribosomal subunit protein eL28Family
CB [auth CD]IPR019775WD40 repeat, conserved siteConserved Site
CB [auth CD]IPR012972NLEDomain
CB [auth CD]IPR036322WD40-repeat-containing domain superfamilyHomologous Superfamily
CB [auth CD]IPR020472PAC1/LIS1-like, WD-40 repeatRepeat
CB [auth CD]IPR001680WD40 repeatRepeat
CB [auth CD]IPR028599WD repeat WDR12/Ytm1Family
CB [auth CD]IPR015943WD40/YVTN repeat-like-containing domain superfamilyHomologous Superfamily
G [auth CL]IPR050755TRAFAC YlqF/YawG GTPases, Ribosome MaturationFamily
G [auth CL]IPR030378Circularly permuted (CP)-type guanine nucleotide-binding (G) domainDomain
G [auth CL]IPR006073GTP binding domainDomain
G [auth CL]IPR014813Guanine nucleotide-binding protein-like 3, N-terminal domainDomain
G [auth CL]IPR023179GTP-binding protein, orthogonal bundle domain superfamilyHomologous Superfamily
G [auth CL]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
I [auth CO]IPR019434Domain of unknown function DUF2423Domain