9AX8 | pdb_00009ax8

70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
D [auth 3]SCOP2B SuperfamilyRibosomal protein L30p/L7e 8096372 3001378 SCOP2B (2022-06-29)
E [auth 4]SCOP2B SuperfamilyTranslational proteins 8032955 3000811 SCOP2B (2022-06-29)
J [auth 9]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8035393 3000334 SCOP2B (2022-06-29)
J [auth 9]SCOP2B SuperfamilyNucleic acid-binding proteins 8035394 3000135 SCOP2B (2022-06-29)
L [auth F]SCOP2B SuperfamilyRL5-like 8107534 3001709 SCOP2B (2022-06-29)
O [auth K]SCOP2B Superfamily50S Ribosomal protein L14-like 8106350 3000433 SCOP2B (2022-06-29)
P [auth L]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8096018 3001045 SCOP2B (2022-06-29)
Q [auth M]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8096366 3000884 SCOP2B (2022-06-29)
R [auth N]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8093462 3000995 SCOP2B (2022-06-29)
W [auth S]SCOP2B SuperfamilyRibosomal protein L22 8096336 3001078 SCOP2B (2022-06-29)
BA [auth Y]SCOP2B SuperfamilyRibosomal protein L36 8093434 3001346 SCOP2B (2022-06-29)
FA [auth d]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8097394 3001473 SCOP2B (2022-06-29)
HA [auth f]SCOP2B SuperfamilyRibosomal protein S6 8066495 3001323 SCOP2B (2022-06-29)
IA [auth g]SCOP2B SuperfamilyRibosomal protein S7 8077979 3000799 SCOP2B (2022-06-29)
MA [auth k]SCOP2B SuperfamilyTranslational machinery components 8035368 3000571 SCOP2B (2022-06-29)
NA [auth l]SCOP2B SuperfamilyNucleic acid-binding proteins 8097378 3000135 SCOP2B (2022-06-29)
RA [auth p]SCOP2B SuperfamilyRibosomal protein S16 8097402 3000680 SCOP2B (2022-06-29)
WA [auth u]SCOP2B SuperfamilyRibosomal protein S21 8093478 3002159 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth 0]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
B [auth 1]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
D [auth 3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
E [auth 4]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
F [auth 5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
H [auth 7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
J [auth 9]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
J [auth 9]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
K [auth E]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
L [auth F]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
L [auth F]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
L [auth F]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
M [auth H]PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
M [auth H]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
N [auth J]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
O [auth K]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
O [auth K]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
P [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
P [auth L]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
Q [auth M]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
Q [auth M]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
R [auth N]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
R [auth N]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
T [auth P]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
T [auth P]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
U [auth Q]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
V [auth R]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
V [auth R]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
W [auth S]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
X [auth T]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
X [auth T]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
Y [auth U]PF01165Ribosomal protein S21 (Ribosomal_S21)Ribosomal protein S21- Family
BA [auth Y]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth 0]50S ribosomal protein L27
B [auth 1]50S ribosomal protein L28
C [auth 2]50S ribosomal protein L29---
D [auth 3]50S ribosomal protein L30
E [auth 4]50S ribosomal protein L3
F [auth 5]50S ribosomal protein L32
G [auth 6]50S ribosomal protein L33---
H [auth 7]50S ribosomal protein L34
I [auth 8]50S ribosomal protein L35---
J [auth 9]50S ribosomal protein L2
K [auth E]50S ribosomal protein L4
L [auth F]50S ribosomal protein L5
M [auth H]50S ribosomal protein L6
N [auth J]50S ribosomal protein L13---
O [auth K]50S ribosomal protein L14
P [auth L]50S ribosomal protein L15
Q [auth M]50S ribosomal protein L16
R [auth N]50S ribosomal protein L17
S [auth O]50S ribosomal protein L18---
T [auth P]50S ribosomal protein L19
U [auth Q]50S ribosomal protein L20
V [auth R]50S ribosomal protein L21
W [auth S]50S ribosomal protein L22
X [auth T]50S ribosomal protein L23
Y [auth U]50S ribosomal protein L24---
Z [auth V]50S ribosomal protein L25---
AA [auth X]5S ribosomal RNA---
BA [auth Y]50S ribosomal protein L36
CA [auth a]16S ribosomal RNA---
DA [auth b]30S ribosomal protein S2---
EA [auth c]30S ribosomal protein S3
FA [auth d]30S ribosomal protein S4
GA [auth e]30S ribosomal protein S5---
HA [auth f]30S ribosomal protein S6
IA [auth g]30S ribosomal protein S7
JA [auth h]30S ribosomal protein S8
KA [auth i]30S ribosomal protein S9---
LA [auth j]30S ribosomal protein S10
MA [auth k]30S ribosomal protein S11
NA [auth l]30S ribosomal protein S12
OA [auth m]30S ribosomal protein S13
PA [auth n]30S ribosomal protein S14
RA [auth p]30S ribosomal protein S16
SA [auth q]30S ribosomal protein S17---
TA [auth r]30S ribosomal protein S18
UA [auth s]30S ribosomal protein S19---
VA [auth t]30S ribosomal protein S20
WA [auth u]30S ribosomal protein S21
XA [auth x]mRNA---
YA [auth y]P-site tRNA-fMet M1---
ZA [auth z]Translation initiation factor IF2 -
AB [auth A]23S ribosomal RNA---
QA [auth o]30S ribosomal protein S15---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth 0]IPR001684Large ribosomal subunit protein bL27Family
A [auth 0]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
B [auth 1]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
B [auth 1]IPR037147Large ribosomal subunit protein bL28 superfamilyHomologous Superfamily
B [auth 1]IPR026569Large ribosomal subunit protein bL28Family
B [auth 1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
D [auth 3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
D [auth 3]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
D [auth 3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
D [auth 3]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
E [auth 4]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
E [auth 4]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
E [auth 4]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
E [auth 4]IPR000597Large ribosomal subunit protein uL3Family
F [auth 5]IPR002677Large ribosomal subunit protein bL32Family
F [auth 5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
F [auth 5]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
H [auth 7]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
H [auth 7]IPR000271Large ribosomal subunit protein bL34Family
J [auth 9]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
J [auth 9]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
J [auth 9]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
J [auth 9]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
J [auth 9]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
J [auth 9]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
J [auth 9]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
J [auth 9]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
J [auth 9]IPR002171Large ribosomal subunit protein uL2Family
K [auth E]IPR013005Large ribosomal subunit protein uL4-likeFamily
K [auth E]IPR002136Large ribosomal subunit protein uL4Family
K [auth E]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
L [auth F]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
L [auth F]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
L [auth F]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
L [auth F]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
L [auth F]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
L [auth F]IPR002132Large ribosomal subunit protein uL5Family
M [auth H]IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
M [auth H]IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
M [auth H]IPR000702Large ribosomal subunit protein uL6-likeFamily
M [auth H]IPR019906Large ribosomal subunit protein uL6, bacterial-typeFamily
M [auth H]IPR002358Large ribosomal subunit protein uL6, conserved siteConserved Site
O [auth K]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
O [auth K]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
O [auth K]IPR000218Large ribosomal subunit protein uL14Family
O [auth K]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
P [auth L]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
P [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
P [auth L]IPR030878Large ribosomal subunit protein uL15Family
P [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
P [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
Q [auth M]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
Q [auth M]IPR020798Large ribosomal subunit protein uL16, conserved siteConserved Site
Q [auth M]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
Q [auth M]IPR016180Large ribosomal subunit protein uL16 domainDomain
Q [auth M]IPR047873Large ribosomal subunit protein uL16Family
R [auth N]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
R [auth N]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
R [auth N]IPR000456Large ribosomal subunit protein bL17Family
T [auth P]IPR001857Large ribosomal subunit protein bL19Family
T [auth P]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
T [auth P]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
T [auth P]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
U [auth Q]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
U [auth Q]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
U [auth Q]IPR005813Large ribosomal subunit protein bL20Family
V [auth R]IPR028909Large ribosomal subunit protein bL21-likeFamily
V [auth R]IPR001787Large ribosomal subunit protein bL21Family
V [auth R]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
V [auth R]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
W [auth S]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
W [auth S]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
W [auth S]IPR001063Large ribosomal subunit protein uL22Family
W [auth S]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
W [auth S]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
X [auth T]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
X [auth T]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
X [auth T]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
X [auth T]IPR013025Large ribosomal subunit protein uL23-likeFamily
BA [auth Y]IPR000473Large ribosomal subunit protein bL36Family
BA [auth Y]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
EA [auth c]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
EA [auth c]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
EA [auth c]IPR004087K Homology domainDomain
EA [auth c]IPR004044K Homology domain, type 2Domain
EA [auth c]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
EA [auth c]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
EA [auth c]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
EA [auth c]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
FA [auth d]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
FA [auth d]IPR002942RNA-binding S4 domainDomain
FA [auth d]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
FA [auth d]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
FA [auth d]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
FA [auth d]IPR022801Small ribosomal subunit protein uS4Family
HA [auth f]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
HA [auth f]IPR000529Small ribosomal subunit protein bS6Family
HA [auth f]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
HA [auth f]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
HA [auth f]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
IA [auth g]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
IA [auth g]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
IA [auth g]IPR000235Small ribosomal subunit protein uS7Family
IA [auth g]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
IA [auth g]IPR023798Small ribosomal subunit protein uS7 domainDomain
JA [auth h]IPR000630Small ribosomal subunit protein uS8Family
JA [auth h]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
JA [auth h]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
LA [auth j]IPR001848Small ribosomal subunit protein uS10Family
LA [auth j]IPR027486Small ribosomal subunit protein uS10 domainDomain
LA [auth j]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
LA [auth j]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
MA [auth k]IPR001971Small ribosomal subunit protein uS11Family
MA [auth k]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
MA [auth k]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
MA [auth k]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
NA [auth l]IPR006032Small ribosomal subunit protein uS12Family
NA [auth l]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
NA [auth l]IPR005679Ribosomal protein uS12, bacterial-typeFamily
OA [auth m]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
OA [auth m]IPR001892Small ribosomal subunit protein uS13Family
OA [auth m]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
OA [auth m]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
OA [auth m]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
PA [auth n]IPR001209Small ribosomal subunit protein uS14Family
PA [auth n]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
PA [auth n]IPR023036Small ribosomal subunit protein uS14, bacteria/plastidFamily
RA [auth p]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
RA [auth p]IPR000307Small ribosomal subunit protein bS16Family
RA [auth p]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
TA [auth r]IPR001648Small ribosomal subunit protein bS18Family
TA [auth r]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
TA [auth r]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
VA [auth t]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
VA [auth t]IPR002583Small ribosomal subunit protein bS20Family
WA [auth u]IPR038380Small ribosomal subunit protein bS21 superfamilyHomologous Superfamily
WA [auth u]IPR018278Small ribosomal subunit protein bS21, conserved siteConserved Site
WA [auth u]IPR001911Small ribosomal subunit protein bS21Family
ZA [auth z]IPR005225Small GTP-binding domainDomain
ZA [auth z]IPR000178Translation initiation factor IF-2, bacterial-likeFamily
ZA [auth z]IPR000795Translational (tr)-type GTP-binding domainDomain
ZA [auth z]IPR053905Elongation factor G-like, domain IIDomain
ZA [auth z]IPR004161Translation elongation factor EFTu-like, domain 2Domain
ZA [auth z]IPR006847Translation initiation factor IF-2, N-terminalDomain
ZA [auth z]IPR044145Translation initiation factor IF-2, domain IIDomain
ZA [auth z]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
ZA [auth z]IPR015760Translation initiation factor IF- 2Family
ZA [auth z]IPR036925Translation initiation factor IF-2, domain 3 superfamilyHomologous Superfamily
ZA [auth z]IPR023115Translation initiation factor IF- 2, domain 3Domain
ZA [auth z]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily