9CDB | pdb_00009cdb

CryoEM structure of CRISPR associated effector, CARF-Adenosine deaminase 1, Cad1, in cA6 (partial density) bound form with ATP (partial density).

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF09623	CRISPR-associated protein NE0113 (Cas_NE0113) (Cas_NE0113)	CRISPR-associated protein NE0113 (Cas_NE0113)	-	Family
A, B, C, D, E A, B, C, D, E, F	PF00962	Adenosine deaminase (A_deaminase)	Adenosine deaminase		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Adenosine deaminase domain-containing protein	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines adenosine deaminase activity hydrolase activity catalytic activity deaminase activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	glycosyl compound metabolic process catabolic process purine nucleoside catabolic process carbohydrate derivative metabolic process nucleobase-containing compound metabolic process nucleobase-containing small molecule metabolic process small molecule metabolic process purine ribonucleoside metabolic process carbohydrate derivative catabolic process adenosine catabolic process primary metabolic process glycosyl compound catabolic process purine-containing compound catabolic process nucleoside metabolic process glycosyl compound metabolic process catabolic process purine nucleoside catabolic process carbohydrate derivative metabolic process nucleobase-containing compound metabolic process nucleobase-containing small molecule metabolic process small molecule metabolic process purine ribonucleoside metabolic process carbohydrate derivative catabolic process adenosine catabolic process primary metabolic process glycosyl compound catabolic process purine-containing compound catabolic process nucleoside metabolic process nucleobase-containing compound catabolic process purine-containing compound metabolic process adenosine metabolic process nucleobase-containing small molecule catabolic process nucleoside catabolic process metabolic process cellular process small molecule catabolic process ribonucleoside catabolic process purine nucleoside metabolic process purine ribonucleoside catabolic process ribonucleoside metabolic process purine-containing compound salvage purine nucleobase metabolic process nucleobase biosynthetic process purine nucleobase biosynthetic process hypoxanthine biosynthetic process metabolic compound salvage hypoxanthine metabolic process biosynthetic process purine-containing compound biosynthetic process nucleobase metabolic process hypoxanthine salvage purine nucleobase salvage nucleoside biosynthetic process carbohydrate derivative biosynthetic process glycosyl compound biosynthetic process inosine metabolic process small molecule biosynthetic process purine ribonucleoside biosynthetic process ribonucleoside biosynthetic process nucleobase-containing compound biosynthetic process nucleobase-containing small molecule biosynthetic process inosine biosynthetic process purine nucleoside biosynthetic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
G [auth H], H [auth I], I [auth J]	RNA (5'-R(PAPAPAPAPAPA)-3')	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR001365	Adenosine deaminase domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR019092	CRISPR system ring nuclease SSO2081-like domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR006330	Adenosine/adenine deaminase	Family
A, B, C, D, E A, B, C, D, E, F	IPR032466	Metal-dependent hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.