9FAT | pdb_00009fat

CryoEM structure of human full-length alpha1beta3gamma2 GABA(A)R in complex with GARLH4, the TMD of Neuroligin2, Megabody38 and pregnenolone sulfate


Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, D
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
A, D
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
B, E
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
B, E
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
PF02932Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb)Neurotransmitter-gated ion-channel transmembrane region- Family
PF02931Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD)Neurotransmitter-gated ion-channel ligand binding domain- Family
H [auth L]PF10242Lipoma HMGIC fusion partner-like protein (L_HMGIC_fpl)Lipoma HMGIC fusion partner-like protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, D
Gamma-aminobutyric acid receptor subunit alpha-1
B, E
Gamma-aminobutyric acid receptor subunit beta-3
Isoform 2 of Gamma-aminobutyric acid receptor subunit gamma-2
F [auth G]Megabody38---
G [auth H]Neuroligin-2
H [auth L]LHFPL tetraspan subfamily member 4 protein

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, D
IPR001390Gamma-aminobutyric-acid A receptor, alpha subunitFamily
A, D
IPR005431Gamma-aminobutyric-acid A receptor, alpha 1 subunitFamily
A, D
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
A, D
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
A, D
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
A, D
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
A, D
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
A, D
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
A, D
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
A, D
IPR047024Gamma-aminobutyric acid receptor subunit alpha 1-6, transmembrane domainDomain
A, D
IPR047079Gamma-aminobutyric acid receptor subunit alpha-1, extracellular domainDomain
A, D
IPR006201Neurotransmitter-gated ion-channelFamily
B, E
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
B, E
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
B, E
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
B, E
IPR002289Gamma-aminobutyric-acid A receptor, beta subunitFamily
B, E
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
B, E
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
B, E
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
B, E
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
B, E
IPR006201Neurotransmitter-gated ion-channelFamily
IPR005437Gamma-aminobutyric acid receptor subunit gamma-1/4Family
IPR006202Neurotransmitter-gated ion-channel ligand-binding domainDomain
IPR036719Neurotransmitter-gated ion-channel transmembrane domain superfamilyHomologous Superfamily
IPR006028Gamma-aminobutyric acid A receptor/Glycine receptor alphaFamily
IPR005439Gamma-aminobutyric-acid A receptor, gamma 2 subunitFamily
IPR006029Neurotransmitter-gated ion-channel transmembrane domainDomain
IPR036734Neurotransmitter-gated ion-channel ligand-binding domain superfamilyHomologous Superfamily
IPR018000Neurotransmitter-gated ion-channel, conserved siteConserved Site
IPR038050Neuronal acetylcholine receptorHomologous Superfamily
IPR006201Neurotransmitter-gated ion-channelFamily
G [auth H]IPR051093Neuroligin and Bile salt-activated lipaseFamily
G [auth H]IPR002018Carboxylesterase, type BDomain
G [auth H]IPR019819Carboxylesterase type B, conserved siteConserved Site
G [auth H]IPR000460NeuroliginFamily
G [auth H]IPR029058Alpha/Beta hydrolase foldHomologous Superfamily
H [auth L]IPR019372Lipoma HMGIC fusion partner-like proteinFamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, D
PharosP14867
B, E
PharosP28472
PharosP18507
G [auth H]PharosQ8NFZ4
H [auth L]PharosQ7Z7J7