9IS4 | pdb_00009is4

Cryo-EM structure of a TEF30-associated intermediate C2S-type PSII-LHCII supercomplex from Chlamydomonas reinhardtii

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth A]	SCOP2B Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8094419	3000736	SCOP2B (2022-06-29)
W [auth a]	SCOP2B Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8094419	3000736	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	Photosystem II antenna protein-like	8094573	3001674	SCOP2B (2022-06-29)
X [auth b]	SCOP2B Superfamily	Photosystem II antenna protein-like	8094573	3001674	SCOP2B (2022-06-29)
D [auth C]	SCOP2B Superfamily	Photosystem II antenna protein-like	8094477	3001674	SCOP2B (2022-06-29)
Y [auth c]	SCOP2B Superfamily	Photosystem II antenna protein-like	8094477	3001674	SCOP2B (2022-06-29)
E [auth D]	SCOP2B Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8094383	3000736	SCOP2B (2022-06-29)
Z [auth d]	SCOP2B Superfamily	Bacterial photosystem II reaction centre, L and M subunits	8094383	3000736	SCOP2B (2022-06-29)
BA [auth f]	SCOP2B Superfamily	Cytochrome b559 subunits	8093904	3001602	SCOP2B (2022-06-29)
G [auth F]	SCOP2B Superfamily	Cytochrome b559 subunits	8093904	3001602	SCOP2B (2022-06-29)
H [auth G]	SCOP2B Superfamily	Chlorophyll a-b binding protein	8094615	3000343	SCOP2B (2022-06-29)
CA [auth h]	SCOP2B Superfamily	Photosystem II 10 kDa phosphoprotein PsbH	8094651	3001547	SCOP2B (2022-06-29)
I [auth H]	SCOP2B Superfamily	Photosystem II 10 kDa phosphoprotein PsbH	8094651	3001547	SCOP2B (2022-06-29)
J [auth I]	SCOP2B Superfamily	Photosystem II reaction center protein I, PsbI	8094000	3001590	SCOP2B (2022-06-29)
DA [auth i]	SCOP2B Superfamily	Photosystem II reaction center protein I, PsbI	8094000	3001590	SCOP2B (2022-06-29)
EA [auth k]	SCOP2B Superfamily	Photosystem II reaction center protein K, PsbK	8093946	3001585	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Photosystem II reaction center protein K, PsbK	8093946	3001585	SCOP2B (2022-06-29)
FA [auth l]	SCOP2B Superfamily	Photosystem II reaction center protein L, PsbL	8094509	3001523	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Photosystem II reaction center protein L, PsbL	8094509	3001523	SCOP2B (2022-06-29)
GA [auth m]	SCOP2B Superfamily	Photosystem II reaction center protein M, PsbM	8094094	3001573	SCOP2B (2022-06-29)
M	SCOP2B Superfamily	Photosystem II reaction center protein M, PsbM	8094094	3001573	SCOP2B (2022-06-29)
N	SCOP2B Superfamily	Chlorophyll a-b binding protein	8094579	3000343	SCOP2B (2022-06-29)
O	SCOP2B Superfamily	OMPA barrel-like	8095525	3000208	SCOP2B (2022-06-29)
P [auth S]	SCOP2B Superfamily	Chlorophyll a-b binding protein	8100486	3000343	SCOP2B (2022-06-29)
U [auth Y]	SCOP2B Superfamily	Chlorophyll a-b binding protein	8094539	3000343	SCOP2B (2022-06-29)
LA [auth z]	SCOP2B Superfamily	PsbZ-like	8094160	3001624	SCOP2B (2022-06-29)
V [auth Z]	SCOP2B Superfamily	PsbZ-like	8094160	3001624	SCOP2B (2022-06-29)
AA [auth e]	SCOP2B Superfamily	Cytochrome b559 subunits	8094631	3001602	SCOP2B (2022-06-29)
F [auth E]	SCOP2B Superfamily	Cytochrome b559 subunits	8094631	3001602	SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A], W [auth a]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family
C [auth B], X [auth b]	PF00421	Photosystem II protein (PSII)	Photosystem II protein	-	Family
D [auth C], Y [auth c]	PF00421	Photosystem II protein (PSII)	Photosystem II protein	-	Family
E [auth D], Z [auth d]	PF00124	Photosynthetic reaction centre protein (Photo_RC)	Photosynthetic reaction centre protein	-	Family
BA [auth f], G [auth F]	PF00283	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits	-	Family
H [auth G]	PF00504	Chlorophyll A-B binding protein (Chloroa_b-bind)	Chlorophyll A-B binding protein	-	Family
CA [auth h], I [auth H]	PF00737	Photosystem II 10 kDa phosphoprotein (PsbH)	Photosystem II 10 kDa phosphoprotein	-	Family
DA [auth i], J [auth I]	PF02532	Photosystem II reaction centre I protein (PSII 4.8 kDa protein) (PsbI)	Photosystem II reaction centre I protein (PSII 4.8 kDa protein)	-	Family
EA [auth k], K	PF02533	Photosystem II 4 kDa reaction centre component (PsbK)	Photosystem II 4 kDa reaction centre component	-	Family
FA [auth l], L	PF02419	PsbL protein (PsbL)	PsbL protein	-	Family
GA [auth m], M	PF05151	Photosystem II reaction centre M protein (PsbM) (PsbM)	Photosystem II reaction centre M protein (PsbM)	-	Family
N	PF00504	Chlorophyll A-B binding protein (Chloroa_b-bind)	Chlorophyll A-B binding protein	-	Family
O	PF01716	Manganese-stabilising protein / photosystem II polypeptide (MSP)	Manganese-stabilising protein / photosystem II polypeptide	-	Family
P [auth S]	PF00504	Chlorophyll A-B binding protein (Chloroa_b-bind)	Chlorophyll A-B binding protein	-	Family
IA [auth t], Q [auth T]	PF01405	Photosystem II reaction centre T protein (PsbT)	Photosystem II reaction centre T protein	-	Family
JA [auth v], R [auth V]	PF05969	Photosystem II complex subunit Ycf12 (PSII_Ycf12)	Photosystem II complex subunit Ycf12	-	Family
S [auth W]	PF07123	Photosystem II reaction centre W protein (PsbW) (PsbW)	Photosystem II reaction centre W protein (PsbW)	-	Family
KA [auth x], T [auth X]	PF06596	Photosystem II reaction centre X protein (PsbX) (PsbX)	Photosystem II reaction centre X protein (PsbX)	-	Family
U [auth Y]	PF00504	Chlorophyll A-B binding protein (Chloroa_b-bind)	Chlorophyll A-B binding protein	-	Family
LA [auth z], V [auth Z]	PF01737	YCF9 (Ycf9)	YCF9	-	Family
AA [auth e], F [auth E]	PF00283	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits (Cytochrom_B559)	Cytochrome b559, alpha (gene psbE) and beta (gene psbF)subunits	-	Family
AA [auth e], F [auth E]	PF00284	Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit (Cytochrom_B559a)	Lumenal portion of Cytochrome b559, alpha (gene psbE) subunit	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth 1]	PDZ domain-containing protein	-	-	-
B [auth A], W [auth a]	Photosystem II protein D1	oxidoreductase activity oxygen evolving activity catalytic activity chlorophyll binding binding tetrapyrrole binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor oxidoreductase activity, acting on diphenols and related substances as donors	response to stimulus response to chemical response to stress response to herbicide response to toxic substance photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
C [auth B], X [auth b]	Photosystem II CP47 reaction center protein	chlorophyll binding binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
D [auth C], Y [auth c]	Photosystem II CP43 reaction center protein	chlorophyll binding binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
E [auth D], Z [auth d]	Photosystem II D2 protein	oxidoreductase activity oxygen evolving activity catalytic activity chlorophyll binding binding tetrapyrrole binding cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain photosynthetic electron transport in photosystem II metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
BA [auth f], G [auth F]	Cytochrome b559 subunit beta	binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
H [auth G]	Chlorophyll a-b binding protein, chloroplastic	chlorophyll binding binding tetrapyrrole binding	response to light stimulus response to stimulus response to radiation response to abiotic stimulus photosynthesis, light harvesting in photosystem I photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane photosystem I
CA [auth h], I [auth H]	Photosystem II reaction center protein H	ion binding binding anion binding phosphate ion binding small molecule binding	regulation of protein stability biological regulation regulation of biological quality protein stabilization photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
DA [auth i], J [auth I]	Photosystem II reaction center protein I	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
EA [auth k], K	Photosystem II reaction center protein K	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
FA [auth l], L	Photosystem II reaction center protein L	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
GA [auth m], M	Photosystem II reaction center protein M	-	photosynthesis photosynthesis, light reaction metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
N	Chlorophyll a-b binding protein, chloroplastic	chlorophyll binding binding tetrapyrrole binding	response to light stimulus response to stimulus response to radiation response to abiotic stimulus photosynthesis, light harvesting in photosystem I photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane photosystem I
O	Oxygen-evolving enhancer protein 1, chloroplastic	oxidoreductase activity oxygen evolving activity catalytic activity	photosynthesis protein-containing complex organization photosynthesis, light reaction generation of precursor metabolites and energy photosystem II assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex assembly cellular process metabolic process cellular component organization or biogenesis regulation of biological process regulation of cellular process photosynthesis protein-containing complex organization photosynthesis, light reaction generation of precursor metabolites and energy photosystem II assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex assembly cellular process metabolic process cellular component organization or biogenesis regulation of biological process regulation of cellular process regulation of photosynthesis photosystem II stabilization regulation of photosynthesis, light reaction biological regulation regulation of generation of precursor metabolites and energy regulation of metabolic process	chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope thylakoid chloroplast membrane intracellular membraneless organelle intracellular membrane-bounded organelle thylakoid membrane organelle chloroplast thylakoid outer membrane cytoplasm photosynthetic membrane organelle membrane protein-containing complex photosystem catalytic complex photosystem II membrane protein complex photosystem II oxygen evolving complex oxidoreductase complex
P [auth S]	Chlorophyll a-b binding protein, chloroplastic	chlorophyll binding binding tetrapyrrole binding	response to light stimulus response to stimulus response to radiation response to abiotic stimulus photosynthesis, light harvesting in photosystem I photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane photosystem I
IA [auth t], Q [auth T]	Photosystem II reaction center protein T	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
JA [auth v], R [auth V]	Photosystem II reaction center protein Psb30	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
S [auth W]	Photosystem II reaction center W protein, chloroplastic	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
KA [auth x], T [auth X]	Chloroplast photosystem II subunit X	-	photosynthesis metabolic process cellular process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid
U [auth Y]	Chlorophyll a-b binding protein, chloroplastic	chlorophyll binding binding tetrapyrrole binding	response to light stimulus response to stimulus response to radiation response to abiotic stimulus photosynthesis, light harvesting in photosystem I photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane photosystem I
LA [auth z], V [auth Z]	Photosystem II reaction center protein Z	-	photosynthesis metabolic process cellular process regulation of biological process regulation of cellular process regulation of photosynthesis photosynthesis, light reaction photosystem II stabilization regulation of photosynthesis, light reaction biological regulation regulation of generation of precursor metabolites and energy generation of precursor metabolites and energy regulation of metabolic process	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane
HA [auth r]	Chlorophyll a-b binding protein CP29	chlorophyll binding binding tetrapyrrole binding cation binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid photosystem I protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid photosystem I thylakoid light-harvesting complex chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane light-harvesting complex plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid membrane protein complex chloroplast thylakoid outer membrane cytoplasm organelle membrane
AA [auth e], F [auth E]	Cytochrome b559 subunit alpha	binding tetrapyrrole binding heme binding electron transfer activity cation binding transition metal ion binding iron ion binding ion binding metal ion binding small molecule binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle photosystem II reaction center intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth 1]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
A [auth 1]	IPR001478	PDZ domain	Domain
B [auth A], W [auth a]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
B [auth A], W [auth a]	IPR005867	Photosystem II protein D1	Family
B [auth A], W [auth a]	IPR000484	Photosynthetic reaction centre, L/M	Family
B [auth A], W [auth a]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
B [auth A], W [auth a]	IPR055266	Photosystem II protein D1/D2	Family
C [auth B], X [auth b]	IPR036001	Photosystem antenna protein-like superfamily	Homologous Superfamily
C [auth B], X [auth b]	IPR000932	Photosystem antenna protein-like	Family
C [auth B], X [auth b]	IPR017486	Photosystem II CP47 reaction centre protein	Family
D [auth C], Y [auth c]	IPR036001	Photosystem antenna protein-like superfamily	Homologous Superfamily
D [auth C], Y [auth c]	IPR000932	Photosystem antenna protein-like	Family
D [auth C], Y [auth c]	IPR005869	Photosystem II CP43 reaction centre protein	Family
D [auth C], Y [auth c]	IPR044900	Photosystem II CP43 reaction centre protein superfamily	Homologous Superfamily
E [auth D], Z [auth d]	IPR005868	Photosystem II D2	Family
E [auth D], Z [auth d]	IPR036854	Photosystem II protein D1/D2 superfamily	Homologous Superfamily
E [auth D], Z [auth d]	IPR000484	Photosynthetic reaction centre, L/M	Family
E [auth D], Z [auth d]	IPR055265	Photosynthetic reaction centre, L/M, conserved site	Conserved Site
E [auth D], Z [auth d]	IPR055266	Photosystem II protein D1/D2	Family
BA [auth f], G [auth F]	IPR006241	Photosystem II cytochrome b559, beta subunit	Family
BA [auth f], G [auth F]	IPR013081	Photosystem II cytochrome b559, N-terminal	Domain
BA [auth f], G [auth F]	IPR006216	Photosystem II cytochrome b559, conserved site	Conserved Site
H [auth G]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
H [auth G]	IPR022796	Chlorophyll A-B binding protein	Family
CA [auth h], I [auth H]	IPR036863	Photosystem II reaction centre protein H superfamily	Homologous Superfamily
CA [auth h], I [auth H]	IPR001056	Photosystem II reaction centre protein H	Family
DA [auth i], J [auth I]	IPR037271	Photosystem II PsbI superfamily	Homologous Superfamily
DA [auth i], J [auth I]	IPR003686	Photosystem II PsbI	Family
EA [auth k], K	IPR037270	Photosystem II PsbK superfamily	Homologous Superfamily
EA [auth k], K	IPR003687	Photosystem II PsbK	Family
FA [auth l], L	IPR003372	Photosystem II PsbL	Family
FA [auth l], L	IPR037266	Photosystem II PsbL superfamily	Homologous Superfamily
GA [auth m], M	IPR007826	Photosystem II PsbM	Family
GA [auth m], M	IPR037269	Photosystem II PsbM superfamily	Homologous Superfamily
N	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
N	IPR022796	Chlorophyll A-B binding protein	Family
O	IPR011250	Outer membrane protein/outer membrane enzyme PagP, beta-barrel	Homologous Superfamily
O	IPR002628	Photosystem II extrinsic protein O	Family
P [auth S]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
P [auth S]	IPR022796	Chlorophyll A-B binding protein	Family
IA [auth t], Q [auth T]	IPR001743	Photosystem II PsbT	Family
IA [auth t], Q [auth T]	IPR037268	Photosystem II PsbT superfamily	Homologous Superfamily
JA [auth v], R [auth V]	IPR010284	Photosystem II reaction center protein Ycf12	Family
S [auth W]	IPR009806	Photosystem II PsbW, class 2	Family
KA [auth x], T [auth X]	IPR009518	Photosystem II PsbX	Family
U [auth Y]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
U [auth Y]	IPR022796	Chlorophyll A-B binding protein	Family
LA [auth z], V [auth Z]	IPR036512	Photosystem II PsbZ superfamily	Homologous Superfamily
LA [auth z], V [auth Z]	IPR002644	Photosystem II PsbZ, reaction centre	Family
HA [auth r]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
HA [auth r]	IPR022796	Chlorophyll A-B binding protein	Family
AA [auth e], F [auth E]	IPR013081	Photosystem II cytochrome b559, N-terminal	Domain
AA [auth e], F [auth E]	IPR006217	Photosystem II cytochrome b559, alpha subunit	Family
AA [auth e], F [auth E]	IPR013082	Photosystem II cytochrome b559, alpha subunit, lumenal region	Domain
AA [auth e], F [auth E]	IPR037025	Photosystem II cytochrome b559, alpha subunit superfamily	Homologous Superfamily
AA [auth e], F [auth E]	IPR006216	Photosystem II cytochrome b559, conserved site	Conserved Site