9ISH | pdb_00009ish

Crystal structure of nanobody 32 in complex with HSV-2 gD

External Resource: Annotation


SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth D],
D [auth B]		Heavy ChainIGHV1 -glycoprotein dSAbDab (2025-06-13)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth C],
C [auth A]		PF01537Herpesvirus glycoprotein D/GG/GX domain (Herpes_glycop_D)Herpesvirus glycoprotein D/GG/GX domainThis domain is found in several Herpes viruses glycoproteins. This is a family includes glycoprotein-D (gD or gIV) which is common to herpes simplex virus types 1 and 2, as well as equine herpes, bovine herpes and Marek's disease virus. Glycoprotein- ...This domain is found in several Herpes viruses glycoproteins. This is a family includes glycoprotein-D (gD or gIV) which is common to herpes simplex virus types 1 and 2, as well as equine herpes, bovine herpes and Marek's disease virus. Glycoprotein-D has been found on the viral envelope and the plasma membrane of infected cells. and gD immunisation can produce an immune response to bovine herpes virus (BHV-1). This response is stronger than that of the other major glycoproteins gB (gI) and gC (gIII) in BHV-1. Glycoprotein G (gG)is one of the seven external glycoproteins of HSV1 and HSV2. This family also contains the glycoprotein GX, (gX), initially identified in Pseudorabies virus.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth C],
C [auth A]		Glycoprotein D- -
B [auth D],
D [auth B]		Nanobody 32---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth C],
C [auth A]		IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
A [auth C],
C [auth A]		IPR002896Herpesvirus glycoprotein D/GG/GX domainDomain