9PC3 | pdb_00009pc3

21bin20S complex (NSF-alphaSNAP-2:1 syntaxin-1a:SNAP-25), non-hydrolyzing, class 12


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyRecA-like P-loop NTPases 8044318 3002019 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyCdc48 domain 2-like 8034899 3000725 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyADC-like 8042527 3001132 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRecA-like P-loop NTPases 8044318 3002019 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyADC-like 8042527 3001132 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyCdc48 domain 2-like 8034899 3000725 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyRecA-like P-loop NTPases 8044318 3002019 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyCdc48 domain 2-like 8034899 3000725 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyRecA-like P-loop NTPases 8044318 3002019 SCOP2B (2022-06-29)
DSCOP2B SuperfamilyADC-like 8042527 3001132 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRecA-like P-loop NTPases 8044318 3002019 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyRecA-like P-loop NTPases 8044318 3002019 SCOP2B (2022-06-29)
GSCOP2B SuperfamilySNARE fusion complex 8043665 3001549 SCOP2B (2022-06-29)
HSCOP2B SuperfamilySNARE fusion complex 8043665 3001549 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySNARE fusion complex 8043667 3001549 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyTPR-like 8080089 3001345 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyTPR-like 8080089 3001345 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyTPR-like 8080089 3001345 SCOP2B (2022-06-29)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02933Cell division protein 48 (CDC48), domain 2 (CDC48_2)Cell division protein 48 (CDC48), domain 2This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the C-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].
Domain
A, B, C, D, E
PF17862AAA+ lid domain (AAA_lid_3)AAA+ lid domainThis entry represents the alpha helical AAA+ lid domain that is found to the C-terminus of AAA domains. Domain
A, B, C, D, E
PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain
A, B, C, D, E
PF02359Cell division protein 48 (CDC48), N-terminal domain (CDC48_N)Cell division protein 48 (CDC48), N-terminal domainThis domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at t ...This domain has a double psi-beta barrel fold and includes VCP-like ATPase and N-ethylmaleimide sensitive fusion protein N-terminal domains. Both the VAT and NSF N-terminal functional domains consist of two structural domains of which this is at the N-terminus. The VAT-N domain found in AAA ATPases Pfam:PF00004 is a substrate 185-residue recognition domain [1].
Domain
A, B, C, D, E
PF21964NSF, AAA+ ATPase lid domain (NSF_ATPase_lid)NSF, AAA+ ATPase lid domainThis entry represents the ATPase lid domain of the second AAA+ ATP-binding domain (also known as D2) of NSF proteins [1], found at the C-terminal. NFS proteins are essential membrane fusion events. They play the role of a chaperone by activating SNAP ...This entry represents the ATPase lid domain of the second AAA+ ATP-binding domain (also known as D2) of NSF proteins [1], found at the C-terminal. NFS proteins are essential membrane fusion events. They play the role of a chaperone by activating SNAP receptor proteins (SNAREs) so that they can participate in membrane fusion [1-5].
Domain
G, H
PF05739SNARE domain (SNARE)SNARE domainMost if not all vesicular membrane fusion events in eukaryotic cells are believed to be mediated by a conserved fusion machinery, the SNARE [soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptors] machinery. The SNARE dom ...Most if not all vesicular membrane fusion events in eukaryotic cells are believed to be mediated by a conserved fusion machinery, the SNARE [soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptors] machinery. The SNARE domain is thought to act as a protein-protein interaction module in the assembly of a SNARE protein complex. It is composed of about 70 amino acids arranged in an alpha-helical structure [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Vesicle-fusing ATPase
G, H
Syntaxin-1A
Synaptosomal-associated protein 25
J, K, L
Alpha-soluble NSF attachment protein

InterPro: Protein Family Classification InterPro Database Homepage