1OOH

Complex of Drosophila odorant binding protein LUSH with butanol


X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, HANGING DROP4.6277PEG 4000, sodium acetate, n-butanol, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K
Crystal Properties
Matthews coefficientSolvent content
2.1242.03

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 46.938α = 90
b = 46.938β = 90
c = 111.328γ = 90
Symmetry
Space GroupP 43

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray105CCDSBC-1Mirrors2002-02-21MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONAPS BEAMLINE 19-BM0.97895APS19-BM

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.253096.70.04321.83.16627164084-3
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R Merge I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
1.251.2989.40.1722.825918

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUTPDB ENTRY 1OOF1.25305960756323634494.490.162940.162940.160440.18501RANDOM11.333
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
0.020.02-0.04
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg14.593
r_dihedral_angle_1_deg3.543
r_scangle_it3.097
r_sphericity_free1.973
r_scbond_it1.92
r_sphericity_bonded1.554
r_mcangle_it1.344
r_angle_refined_deg1.315
r_rigid_bond_restr0.947
r_mcbond_it0.77
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg14.593
r_dihedral_angle_1_deg3.543
r_scangle_it3.097
r_sphericity_free1.973
r_scbond_it1.92
r_sphericity_bonded1.554
r_mcangle_it1.344
r_angle_refined_deg1.315
r_rigid_bond_restr0.947
r_mcbond_it0.77
r_angle_other_deg0.743
r_nbd_refined0.241
r_symmetry_vdw_other0.22
r_symmetry_hbond_refined0.214
r_nbd_other0.208
r_xyhbond_nbd_refined0.137
r_symmetry_vdw_refined0.132
r_chiral_restr0.079
r_bond_refined_d0.01
r_gen_planes_refined0.004
r_bond_other_d0.001
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2081
Nucleic Acid Atoms
Solvent Atoms329
Heterogen Atoms26

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling
CNSphasing