X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION7.5298LiSO4 and PEG 4K, pH 7.5, VAPOR DIFFUSION
Crystal Properties
Matthews coefficientSolvent content
2.2244.49

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 57.54α = 90
b = 85.27β = 91.48
c = 66.15γ = 90
Symmetry
Space GroupP 1 21 1

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray200CCDADSC QUANTUM 42001-04-27MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONESRF BEAMLINE ID14-20.933ESRFID14-2

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Merge I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.3257.740.06915.13.1141980
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.321.3769.1

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodResolution (High)Resolution (Low)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONMOLECULAR REPLACEMENTTHROUGHOUT1.3257.74138538549996.380.32060.149180.14810.1769RANDOM14.928
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg13.592
r_dihedral_angle_1_deg6.012
r_scangle_it4.662
r_scbond_it3.614
r_angle_refined_deg2.607
r_mcangle_it2.076
r_mcbond_it1.873
r_angle_other_deg1.427
r_nbd_refined0.28
r_symmetry_vdw_other0.268
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg13.592
r_dihedral_angle_1_deg6.012
r_scangle_it4.662
r_scbond_it3.614
r_angle_refined_deg2.607
r_mcangle_it2.076
r_mcbond_it1.873
r_angle_other_deg1.427
r_nbd_refined0.28
r_symmetry_vdw_other0.268
r_xyhbond_nbd_refined0.265
r_symmetry_hbond_refined0.219
r_nbd_other0.208
r_symmetry_vdw_refined0.182
r_chiral_restr0.181
r_nbtor_other0.096
r_xyhbond_nbd_other0.092
r_bond_refined_d0.033
r_gen_planes_refined0.015
r_bond_other_d0.002
r_gen_planes_other0.001
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms5156
Nucleic Acid Atoms
Solvent Atoms733
Heterogen Atoms106

Software

Software
Software NamePurpose
REFMACrefinement
XDSdata scaling
AMoREphasing