X-RAY DIFFRACTION

Crystallization

Crystalization Experiments
IDMethodpHTemperatureDetails
1VAPOR DIFFUSION, SITTING DROP8.529325% (w/v) PEG 3350, 0.2M MgCl2, 0.1M Tris-HCl. , pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystal Properties
Matthews coefficientSolvent content
2.5251.24

Crystal Data

Unit Cell
Length ( Å )Angle ( ˚ )
a = 53.502α = 90
b = 132.664β = 90
c = 107.313γ = 90
Symmetry
Space GroupC 2 2 21

Diffraction

Diffraction Experiment
ID #Crystal IDScattering TypeData Collection TemperatureDetectorDetector TypeDetailsCollection DateMonochromatorProtocol
11x-ray100CCDADSC QUANTUM 4mirrors2005-08-18MSINGLE WAVELENGTH
Radiation Source
ID #SourceTypeWavelength ListSynchrotron SiteBeamline
1SYNCHROTRONNSLS BEAMLINE X8C1.1NSLSX8C

Data Collection

Overall
ID #Resolution (High)Resolution (Low)Percent Possible (Observed)R Sym I (Observed)Net I Over Average Sigma (I)RedundancyNumber Reflections (All)Number Reflections (Observed)Observed Criterion Sigma (F)Observed Criterion Sigma (I)B (Isotropic) From Wilson Plot
11.85096.80.06511.84.43471734717
Highest Resolution Shell
ID #Resolution (High)Resolution (Low)Percent Possible (All)Percent Possible (Observed)R-Sym I (Observed)Mean I Over Sigma (Observed)RedundancyNumber Unique Reflections (All)
11.81.8681.70.4292.12.4

Refinement

Statistics
Diffraction IDStructure Solution MethodCross Validation methodStarting modelResolution (High)Resolution (Low)Number Reflections (All)Number Reflections (Observed)Number Reflections (R-Free)Percent Reflections (Observed)R-Factor (All)R-Factor (Observed)R-WorkR-FreeR-Free Selection DetailsMean Isotropic B
X-RAY DIFFRACTIONFOURIER SYNTHESISTHROUGHOUTPDB Entry 2FPR1.8503468132981170096.820.1850.185480.183490.22296RANDOM20.883
Temperature Factor Modeling
Anisotropic B[1][1]Anisotropic B[1][2]Anisotropic B[1][3]Anisotropic B[2][2]Anisotropic B[2][3]Anisotropic B[3][3]
-0.24-0.781.03
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.267
r_dihedral_angle_4_deg18.508
r_dihedral_angle_3_deg11.807
r_dihedral_angle_1_deg6.161
r_scangle_it2.856
r_scbond_it1.806
r_angle_refined_deg1.22
r_mcangle_it1.127
r_mcbond_it0.716
r_nbtor_refined0.309
RMS Deviations
KeyRefinement Restraint Deviation
r_dihedral_angle_2_deg36.267
r_dihedral_angle_4_deg18.508
r_dihedral_angle_3_deg11.807
r_dihedral_angle_1_deg6.161
r_scangle_it2.856
r_scbond_it1.806
r_angle_refined_deg1.22
r_mcangle_it1.127
r_mcbond_it0.716
r_nbtor_refined0.309
r_symmetry_vdw_refined0.223
r_nbd_refined0.199
r_symmetry_hbond_refined0.195
r_xyhbond_nbd_refined0.126
r_chiral_restr0.089
r_bond_refined_d0.011
r_gen_planes_refined0.004
Non-Hydrogen Atoms Used in Refinement
Non-Hydrogen AtomsNumber
Protein Atoms2546
Nucleic Acid Atoms
Solvent Atoms481
Heterogen Atoms18

Software

Software
Software NamePurpose
REFMACrefinement
HKL-2000data reduction
SCALEPACKdata scaling