2KCN | pdb_00002kcn

Solution structure of the antifungal protein PAF from Penicillium chrysogenum

SOLUTION NMR

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NMR Experiment
Experiment	Type	Sample Contents	Solvent	Ionic Strength	pH	Pressure	Temperature (K)	Spectrometer
1	2D 1H-15N HSQC	1.6mM [U-100% 15N] PAF-1	95% H2O/5% D2O	0.04	5.0	ambient	304
2	2D 1H-1H TOCSY	1.6mM [U-100% 15N] PAF-1	95% H2O/5% D2O	0.04	5.0	ambient	304
3	2D 1H-1H NOESY	1.6mM [U-100% 15N] PAF-1	95% H2O/5% D2O	0.04	5.0	ambient	304
4	2D 1H-13C HSQC	1.6mM [U-100% 15N] PAF-1	95% H2O/5% D2O	0.04	5.0	ambient	304
5	3D 1H-15N NOESY	1.6mM [U-100% 15N] PAF-1	95% H2O/5% D2O	0.04	5.0	ambient	304
6	3D 1H-15N TOCSY	1.6mM [U-100% 15N] PAF-1	95% H2O/5% D2O	0.04	5.0	ambient	304

NMR Spectrometer Information
Spectrometer	Manufacturer	Model	Field Strength
1	Bruker	DRX	500
2	Bruker	DRX	700

NMR Refinement
Method	Details	Software
torsion angle dynamics		CYANA

NMR Ensemble Information
Conformer Selection Criteria	structures with the least restraint violations
Conformers Calculated Total Number	80
Conformers Submitted Total Number	20
Representative Model	1 (closest to the average)

Additional NMR Experimental Information
Details	The structure was determined from the 2D NOESY (130ms mixing time) using ATNOS/CANDID/CYANA 2.0

Computation: NMR Software
#	Classification	Version	Software Name	Author
1	automated noe chemical shift assignment	CYANA	2.0	Herrmann, Guntert, Wuthrich
2	nmr structure calculation	CYANA	2.0	Herrmann, Guntert, Wuthrich
3	molecular dynamics calculation	CYANA	2.0	Herrmann, Guntert, Wuthrich
4	protein structure data analysis	CYANA	2.0	Herrmann, Guntert, Wuthrich
5	chemical shift assignment	CYANA	2.0	Herrmann, Guntert, Wuthrich
6	collection	CYANA	2.0	Herrmann, Guntert, Wuthrich
7	refinement	CYANA	2.0	Herrmann, Guntert, Wuthrich
8	automated noe chemical shift assignment	CYANA	2.0	Guntert, Mumenthaler, Wuthrich
9	nmr structure calculation	CYANA	2.0	Guntert, Mumenthaler, Wuthrich
10	molecular dynamics calculation	CYANA	2.0	Guntert, Mumenthaler, Wuthrich
11	protein structure data analysis	CYANA	2.0	Guntert, Mumenthaler, Wuthrich
12	chemical shift assignment	CYANA	2.0	Guntert, Mumenthaler, Wuthrich
13	collection	CYANA	2.0	Guntert, Mumenthaler, Wuthrich
14	automated noe chemical shift assignment	CYANA	2.0	GROMACS, Bekker, Berendse, Dijkstra
15	nmr structure calculation	CYANA	2.0	GROMACS, Bekker, Berendse, Dijkstra
16	molecular dynamics calculation	CYANA	2.0	GROMACS, Bekker, Berendse, Dijkstra
17	protein structure data analysis	CYANA	2.0	GROMACS, Bekker, Berendse, Dijkstra
18	chemical shift assignment	CYANA	2.0	GROMACS, Bekker, Berendse, Dijkstra
19	collection	CYANA	2.0	GROMACS, Bekker, Berendse, Dijkstra
20	automated noe chemical shift assignment	CYANA	2.0	Laskowski, MacArthur
21	nmr structure calculation	CYANA	2.0	Laskowski, MacArthur
22	molecular dynamics calculation	CYANA	2.0	Laskowski, MacArthur
23	protein structure data analysis	CYANA	2.0	Laskowski, MacArthur
24	chemical shift assignment	CYANA	2.0	Laskowski, MacArthur
25	collection	CYANA	2.0	Laskowski, MacArthur
26	automated noe chemical shift assignment	CYANA	2.0	Goddard
27	nmr structure calculation	CYANA	2.0	Goddard
28	molecular dynamics calculation	CYANA	2.0	Goddard
29	protein structure data analysis	CYANA	2.0	Goddard
30	chemical shift assignment	CYANA	2.0	Goddard
31	collection	CYANA	2.0	Goddard
32	automated noe chemical shift assignment	CYANA	2.0	Bruker Biospin
33	nmr structure calculation	CYANA	2.0	Bruker Biospin
34	molecular dynamics calculation	CYANA	2.0	Bruker Biospin
35	protein structure data analysis	CYANA	2.0	Bruker Biospin
36	chemical shift assignment	CYANA	2.0	Bruker Biospin
37	collection	CYANA	2.0	Bruker Biospin