GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 1DPF designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1DPF_GDP_A_200 | 56% | 38% | 0.157 | 0.928 | 1.41 | 1.01 | 3 | 2 | 1 | 0 | 100% | 1 |
| 8GI6_GDP_A_201 | 99% | 58% | 0.051 | 0.986 | 0.95 | 0.68 | 2 | 1 | 0 | 0 | 100% | 1 |
| 8ZNY_GDP_A_201 | 99% | 7% | 0.05 | 0.979 | 3.52 | 1.28 | 12 | 4 | 0 | 0 | 100% | 1 |
| 1OW3_GDP_B_680 | 98% | 39% | 0.059 | 0.985 | 1.05 | 1.33 | 1 | 3 | 0 | 0 | 100% | 1 |
| 8GI3_GDP_A_201 | 97% | 57% | 0.068 | 0.983 | 0.99 | 0.66 | 2 | 1 | 0 | 0 | 100% | 1 |
| 3LW8_GDP_C_201 | 96% | 46% | 0.08 | 0.99 | 0.89 | 1.2 | 1 | 4 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
