NDP: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
NDP is a Ligand Of Interest in 1Y5R designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1Y5R_NDP_A_1 | 83% | 30% | 0.119 | 0.977 | 1.72 | 1.23 | 9 | 4 | 2 | 0 | 100% | 1 |
| 1Y5R_NDP_B_2 | 73% | 32% | 0.136 | 0.965 | 1.59 | 1.25 | 9 | 5 | 6 | 0 | 100% | 1 |
| 3GMD_NDP_C_300 | 89% | 31% | 0.097 | 0.978 | 1.63 | 1.24 | 10 | 4 | 0 | 0 | 100% | 1 |
| 4NMH_NDP_A_302 | 69% | 34% | 0.155 | 0.972 | 1.55 | 1.18 | 4 | 2 | 0 | 0 | 100% | 1 |
| 4K26_NDP_A_304 | 51% | 58% | 0.144 | 0.898 | 0.58 | 1.02 | - | 3 | 6 | 0 | 100% | 1 |
| 1Y5M_NDP_B_2 | 28% | 25% | 0.22 | 0.875 | 1.77 | 1.44 | 8 | 7 | 6 | 0 | 100% | 1 |
| 1US0_NDP_A_318 | 100% | 46% | 0.027 | 0.998 | 1.21 | 0.91 | 3 | - | 4 | 0 | 100% | 1 |
| 2I16_NDP_A_319 | 100% | 46% | 0.028 | 0.998 | 1.2 | 0.9 | 3 | 1 | 0 | 0 | 100% | 1 |
| 2I17_NDP_A_319 | 100% | 46% | 0.029 | 0.998 | 1.22 | 0.89 | 3 | - | 0 | 0 | 100% | 1 |
| 2PF8_NDP_A_318 | 100% | 46% | 0.031 | 0.998 | 1.17 | 0.93 | 3 | - | 4 | 0 | 100% | 1 |
| 2PFH_NDP_A_318 | 100% | 29% | 0.03 | 0.998 | 1.79 | 1.2 | 8 | 7 | 4 | 0 | 100% | 1 |
