Ligand validation:3QVB

UDP: URIDINE-5'-DIPHOSPHATE

UDP is a Ligand Of Interest in 3QVB designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
3QVB_UDP_A_264	26%	37%	0.211	0.851	1.07	1.41	2	6	1	0	100%	0.7
3U2V_UDP_B_270	99%	33%	0.049	0.989	1.12	1.52	2	6	0	0	100%	1
3U2U_UDP_B_268	99%	34%	0.053	0.986	1.05	1.53	-	7	0	0	100%	1
3U2W_UDP_A_264	97%	43%	0.062	0.977	0.73	1.44	-	4	2	0	100%	1
3T7M_UDP_B_264	93%	38%	0.082	0.975	0.94	1.47	1	5	0	0	100%	1
6EQL_UDP_B_301	91%	70%	0.071	0.958	0.38	0.78	-	2	2	0	100%	1
8X3Q_UDP_C_401	100%	3%	0.015	0.998	3.32	2.69	13	13	0	0	100%	1
8X3U_UDP_B_401	100%	3%	0.012	0.999	3.31	2.68	13	13	2	0	100%	1
8VH8_UDP_C_704	100%	62%	0.032	0.995	0.55	0.9	-	1	0	0	100%	1
2B69_UDP_A_900	100%	42%	0.032	0.992	1.03	1.21	2	4	0	0	100%	1
4GYW_UDP_C_1101	100%	37%	0.037	0.988	1.03	1.45	2	4	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.