GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 4WPU designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 4WPU_GDP_A_701 | 81% | 8% | 0.117 | 0.968 | 2.72 | 1.86 | 9 | 6 | 4 | 0 | 100% | 1 |
| 4R43_GDP_A_701 | 85% | 34% | 0.104 | 0.97 | 1.18 | 1.43 | 1 | 6 | 0 | 0 | 100% | 1 |
| 4WOU_GDP_A_701 | 83% | 47% | 0.122 | 0.98 | 0.85 | 1.19 | - | 3 | 0 | 0 | 100% | 1 |
| 4RCG_GDP_A_701 | 82% | 30% | 0.125 | 0.98 | 1.17 | 1.6 | 2 | 8 | 0 | 0 | 100% | 1 |
| 5I67_GDP_A_701 | 81% | 47% | 0.118 | 0.971 | 0.83 | 1.2 | - | 3 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
