PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 5B3S designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5B3S_PGV_A_608 | 88% | 49% | 0.101 | 0.976 | 0.85 | 1.13 | 3 | 3 | 0 | 0 | 100% | 1 |
| 5B3S_PGV_C_304 | 86% | 59% | 0.103 | 0.975 | 0.7 | 0.87 | 1 | 2 | 1 | 0 | 98% | 0.9804 |
| 5B3S_PGV_N_609 | 84% | 46% | 0.106 | 0.969 | 0.97 | 1.1 | 3 | 4 | 0 | 0 | 100% | 1 |
| 5B3S_PGV_P_305 | 84% | 52% | 0.111 | 0.972 | 0.65 | 1.18 | 1 | 5 | 2 | 0 | 100% | 1 |
| 5B3S_PGV_A_607 | 25% | 45% | 0.213 | 0.86 | 1.06 | 1.08 | 2 | 4 | 3 | 0 | 94% | 0.9412 |
| 5B3S_PGV_C_305 | 14% | 25% | 0.228 | 0.783 | 1.26 | 1.77 | 2 | 9 | 4 | 0 | 100% | 1 |
| 5B3S_PGV_N_607 | 11% | 42% | 0.27 | 0.784 | 1.01 | 1.24 | 2 | 8 | 4 | 0 | 100% | 1 |
| 5B3S_PGV_G_104 | 8% | 37% | 0.235 | 0.715 | 1.14 | 1.34 | 2 | 5 | 5 | 0 | 100% | 1 |
| 5B1A_PGV_P_303 | 98% | 35% | 0.064 | 0.985 | 1.06 | 1.51 | 3 | 13 | 4 | 0 | 100% | 1 |
| 5X1B_PGV_C_302 | 95% | 52% | 0.078 | 0.981 | 0.92 | 0.93 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 7COH_PGV_C_267 | 93% | 49% | 0.087 | 0.983 | 0.87 | 1.09 | 3 | 3 | 0 | 0 | 100% | 1 |
| 5ZCQ_PGV_N_608 | 90% | 32% | 0.094 | 0.978 | 1.15 | 1.53 | 5 | 8 | 1 | 0 | 100% | 1 |
