GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5XDW designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5XDW_GDP_A_401 | 96% | 37% | 0.071 | 0.981 | 1.17 | 1.31 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5XDT_GDP_A_401 | 99% | 47% | 0.059 | 0.99 | 1.17 | 0.87 | 2 | 1 | 0 | 0 | 100% | 1 |
| 8HTB_GDP_A_401 | 98% | 50% | 0.066 | 0.989 | 1.02 | 0.93 | 3 | 1 | 0 | 0 | 100% | 1 |
| 6KVP_GDP_A_401 | 98% | 48% | 0.067 | 0.988 | 0.99 | 1.02 | 3 | 3 | 0 | 0 | 100% | 1 |
| 6YD1_GDP_A_401 | 97% | 13% | 0.071 | 0.983 | 1.58 | 2.35 | 4 | 8 | 0 | 0 | 100% | 1 |
| 6RVP_GDP_A_401 | 96% | 33% | 0.075 | 0.985 | 1.52 | 1.13 | 3 | 2 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
