PLP: PYRIDOXAL-5'-PHOSPHATE
PLP is a Ligand Of Interest in 5XEN designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
5XEN_PLP_A_403 | 99% | 37% | 0.04 | 0.986 | 1.4 | 1.07 | 3 | 1 | 2 | 0 | 94% | 0.5 |
5XEN_PLP_A_401 | 99% | 38% | 0.047 | 0.979 | 1.04 | 1.36 | 2 | 3 | 2 | 0 | 100% | 0.5 |
5XEN_PLP_B_403 | 99% | 37% | 0.042 | 0.985 | 1.39 | 1.09 | 2 | - | 4 | 0 | 94% | 0.55 |
5XEN_PLP_B_401 | 99% | 29% | 0.048 | 0.978 | 1.11 | 1.73 | 1 | 6 | 3 | 0 | 100% | 0.45 |
5XEO_PLP_B_401 | 100% | 41% | 0.036 | 0.988 | 1 | 1.29 | - | 3 | 2 | 0 | 100% | 1 |
5XEM_PLP_A_502 | 99% | 45% | 0.04 | 0.986 | 1.14 | 1 | 2 | - | 1 | 0 | 94% | 1 |
2BIE_PLP_A_1361 | 100% | 38% | 0.024 | 0.996 | 1.23 | 1.19 | 1 | 3 | 1 | 0 | 100% | 1 |
2X3L_PLP_A_1211 | 100% | 19% | 0.024 | 0.995 | 1.74 | 1.73 | 2 | 2 | 1 | 0 | 100% | 1 |
3CEJ_PLP_A_832 | 100% | 41% | 0.021 | 0.998 | 1.23 | 1.05 | 1 | 2 | 8 | 0 | 100% | 1 |
3CEM_PLP_A_832 | 100% | 41% | 0.021 | 0.997 | 1.24 | 1.04 | 2 | 2 | 1 | 0 | 100% | 1 |
4PPM_PLP_A_902 | 100% | 7% | 0.019 | 0.998 | 2.88 | 1.91 | 9 | 6 | 0 | 0 | 100% | 1 |