2QL0 | pdb_00002ql0

Zinc-substituted Rubredoxin from Desulfovibrio Vulgaris

• PDB DOI: https://doi.org/10.2210/pdb2QL0/pdb
• BMRB: 15374

• Classification: ELECTRON TRANSPORT
• Organism(s): Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2007-07-12 Released: 2008-07-08 
• Deposition Author(s): Goodfellow, B.J., Nunes, S.G., Volkman, B.F., Moura, J.G., Macedo, A.L., Duarte, I.C., Markley, J.L., Moura, I.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

Goodfellow, B.J., Nunes, S.G., Volkman, B.F., Moura, J.J.G., Macedo, A.L., Duarte, I.C., Markley, J.L., Moura, I.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content 

• Total Structure Weight: 5.64 kDa 
• Atom Count: 389 
• Modeled Residue Count: 52 
• Deposited Residue Count: 52 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Rubredoxin	A	52	N/A	Mutation(s): 0  Gene Names: rub
UniProt
Find proteins for P00269 (Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)) Explore P00269  Go to UniProtKB:  P00269

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2008-07-08 
Deposition Author(s): Goodfellow, B.J., Nunes, S.G., Volkman, B.F., Moura, J.G., Macedo, A.L., Duarte, I.C., Markley, J.L., Moura, I.

Revision History  

• Version 1.0: 2008-07-08
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-22
  Changes: Data collection