The spontaneous base substitution mechanisms of human DNA polymerase beta
Koag, M.C., Lee, S.To be published.
Experimental Data Snapshot
Entity ID: 4 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
DNA polymerase beta | D [auth A] | 326 | Homo sapiens | Mutation(s): 0 Gene Names: POLB EC: 2.7.7.7 (PDB Primary Data), 4.2.99 (PDB Primary Data), 4.2.99.18 (UniProt) | ![]() |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P06746 (Homo sapiens) Explore P06746 Go to UniProtKB: P06746 | |||||
PHAROS: P06746 GTEx: ENSG00000070501 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | P06746 | ||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
XG4 Query on XG4 | I [auth A] | 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine C10 H17 N6 O12 P3 DWGAAFQEGIMTIA-KVQBGUIXSA-N | |||
MN Query on MN | E [auth A], F [auth A] | MANGANESE (II) ION Mn WAEMQWOKJMHJLA-UHFFFAOYSA-N | |||
NA Query on NA | G [auth A], H [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 50.701 | α = 90 |
b = 79.327 | β = 107.58 |
c = 55.474 | γ = 90 |
Software Name | Purpose |
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DENZO | data reduction |
PHENIX | refinement |
PDB_EXTRACT | data extraction |
REFMAC | refinement |
Funding Organization | Location | Grant Number |
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National Institutes of Health/National Institute of Environmental Health Sciences (NIH/NIEHS) | United States | ES23101 |