7CI1 | pdb_00007ci1

Crystal structure of AcrVA2

PDB DOI: https://doi.org/10.2210/pdb7CI1/pdb

Classification: HYDROLASE INHIBITOR
Organism(s): Moraxella bovoculi
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2020-07-07 Released: 2020-10-14
Deposition Author(s): Chen, P., Cheng, Z., Wang, Y.
Funding Organization(s): National Natural Science Foundation of China (NSFC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.30 Å
R-Value Free:
0.251 (Depositor), 0.250 (DCC)
R-Value Work:
0.229 (Depositor), 0.230 (DCC)
R-Value Observed:
0.230 (Depositor)

wwPDB Validation 3D Report Full Report

This is version 1.5 of the entry. See complete history.

Literature

Structural Study on Anti-CRISPR Protein AcrVA2

Chen, P., Sun, W., Cheng, Z., Yang, J., Wang, M., Wang, J., Chen, H., Liu, L., Wang, Y.

(2021) PROG BIOCHEM BIOPHYS

DOI: https://doi.org/10.16476/j.pibb.2020.0223

Macromolecule Content

Total Structure Weight: 74.75 kDa
Atom Count: 4,879
Modeled Residue Count: 591
Deposited Residue Count: 646
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
AcrVA2	A, B	323	Moraxella bovoculi	Mutation(s): 0
UniProt
Find proteins for A0A7M4DUH0 (Moraxella bovoculi) Explore A0A7M4DUH0 Go to UniProtKB: A0A7M4DUH0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	A0A7M4DUH0
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
SPD Query on SPD Download Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain K [auth A] SDF format, chain L [auth B] MOL2 format, chain C [auth A] MOL2 format, chain K [auth A] MOL2 format, chain L [auth B] mmCIF format, chain C [auth A] mmCIF format, chain K [auth A] mmCIF format, chain L [auth B]	C [auth A], K [auth A], L [auth B]	SPERMIDINE C₇ H₁₉ N₃ ATHGHQPFGPMSJY-UHFFFAOYSA-N		Interactions Focus chain C [auth A] Focus chain K [auth A] Focus chain L [auth B] Interactions & Density Focus chain C [auth A] Focus chain K [auth A] Focus chain L [auth B]
EDO Query on EDO Download Ideal Coordinates CCD File SDF format, chain D [auth A] SDF format, chain E [auth A] SDF format, chain F [auth A] SDF format, chain G [auth A] SDF format, chain H [auth A] SDF format, chain I [auth A] SDF format, chain J [auth A] SDF format, chain M [auth B] SDF format, chain N [auth B] MOL2 format, chain D [auth A] MOL2 format, chain E [auth A] MOL2 format, chain F [auth A] MOL2 format, chain G [auth A] MOL2 format, chain H [auth A] MOL2 format, chain I [auth A] MOL2 format, chain J [auth A] MOL2 format, chain M [auth B] MOL2 format, chain N [auth B] mmCIF format, chain D [auth A] mmCIF format, chain E [auth A] mmCIF format, chain F [auth A] mmCIF format, chain G [auth A] mmCIF format, chain H [auth A] mmCIF format, chain I [auth A] mmCIF format, chain J [auth A] mmCIF format, chain M [auth B] mmCIF format, chain N [auth B]	D [auth A] E [auth A] F [auth A] G [auth A] H [auth A] D [auth A], E [auth A], F [auth A], G [auth A], H [auth A], I [auth A], J [auth A], M [auth B], N [auth B]	1,2-ETHANEDIOL C₂ H₆ O₂ LYCAIKOWRPUZTN-UHFFFAOYSA-N		Interactions Focus chain D [auth A] Focus chain E [auth A] Focus chain F [auth A] Focus chain G [auth A] Focus chain H [auth A] Focus chain I [auth A] Focus chain J [auth A] Focus chain M [auth B] Focus chain N [auth B] Interactions & Density Focus chain D [auth A] Focus chain E [auth A] Focus chain F [auth A] Focus chain G [auth A] Focus chain H [auth A] Focus chain I [auth A] Focus chain J [auth A] Focus chain M [auth B] Focus chain N [auth B]