7MWS

Crystal structure of tamarin CD81 large extracellular loop


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.207 
  • R-Value Observed: 0.208 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural insights into hepatitis C virus receptor binding and entry

Kumar, A.Hossain, R.A.Yost, S.A.Bu, W.Wang, Y.Dearborn, A.D.Grakoui, A.Cohen, J.I.Marcotrigiano, J.

(2021) Nature 


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
CD81 proteinA, B97Saguinus oedipusMutation(s): 0 
Gene Names: CD81
UniProt
Find proteins for Q9N0J9 (Saguinus oedipus)
Explore Q9N0J9 
Go to UniProtKB:  Q9N0J9
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
PG4
Query on PG4

Download Ideal Coordinates CCD File 
C [auth A], D [auth B]TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
 Ligand Interaction
GOL
Query on GOL

Download Ideal Coordinates CCD File 
E [auth B]GLYCEROL
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.80 Å
  • R-Value Free: 0.232 
  • R-Value Work: 0.207 
  • R-Value Observed: 0.208 
  • Space Group: I 2 3
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 113.263α = 90
b = 113.263β = 90
c = 113.263γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
SCALAdata scaling
Cootmodel building
DIALSdata collection
MOSFLMdata reduction
PHASERphasing

Structure Validation

View Full Validation Report




Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)United States--

Revision History  (Full details and data files)

  • Version 1.0: 2021-09-15
    Type: Initial release