7SOQ

LaM domain of human LARP1 in complex with AAA RNA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.176 
  • R-Value Observed: 0.176 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structural basis of 3'-end RNA recognition by LARP1

Kozlov, G.Jiang, J.Mattijssen, S.Gaidamakov, S.Nyandwi, S.Maraia, R.Gehring, K.

To be published.

Macromolecules

Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Isoform 2 of La-related protein 1A99Homo sapiensMutation(s): 0 
Gene Names: LARP1KIAA0731LARP
UniProt
Find proteins for Q6PKG0-3 (Homo sapiens)
Explore Q6PKG0-3 
Go to UniProtKB:  Q6PKG0-3
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ6PKG0-3
Protein Feature View
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  • Reference Sequence

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Entity ID: 2
MoleculeChainsLengthOrganismImage
RNA (5'-R(*AP*AP*A)-3')B 3synthetic construct
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.15 Å
  • R-Value Free: 0.188 
  • R-Value Work: 0.176 
  • R-Value Observed: 0.176 
  • Space Group: P 21 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 36.915α = 90
b = 46.474β = 90
c = 59.135γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
Web-Icedata collection
HKL-2000data reduction
HKL-2000data scaling
PHENIXphasing

Structure Validation

View Full Validation Report




Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Canadian Institutes of Health Research (CIHR)Canada--

Revision History  (Full details and data files)

  • Version 1.0: 2022-08-03
    Type: Initial release