8GW6

AtSLAC1 6D mutant in closed state

PDB DOI: https://doi.org/10.2210/pdb8GW6/pdb
EM Map EMD-34303: EMDB EMDataResource

Classification: MEMBRANE PROTEIN
Organism(s): Arabidopsis thaliana
Expression System: Spodoptera frugiperda
Mutation(s): Yes

Deposited: 2022-09-16 Released: 2023-11-15
Deposition Author(s): Lee, Y., Lee, S.
Funding Organization(s): National Research Foundation (NRF, Korea)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 3.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model

Lee, Y., Lee, S.

To be published.

Macromolecule Content

Total Structure Weight: 283.62 kDa
Atom Count: 8,883
Modelled Residue Count: 1,101
Deposited Residue Count: 2,478
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Guard cell S-type anion channel SLAC1,Green fluorescent protein (Fragment)	A, B, C	826	Arabidopsis thaliana	Mutation(s): 5 Gene Names: SLAC1, CDI3, OZS1, RCD3, At1g12480, F5O11.23, T12C24.3, gfp
UniProt
Find proteins for A0A059PIQ0 (Aequorea victoria) Explore A0A059PIQ0 Go to UniProtKB: A0A059PIQ0
Find proteins for Q9LD83 (Arabidopsis thaliana) Explore Q9LD83 Go to UniProtKB: Q9LD83
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Groups	A0A059PIQ0Q9LD83
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
Y01 Query on Y01 Download Ideal Coordinates CCD File SDF format, chain E [auth A] SDF format, chain F [auth A] SDF format, chain H [auth C] MOL2 format, chain E [auth A] MOL2 format, chain F [auth A] MOL2 format, chain H [auth C]	E [auth A], F [auth A], H [auth C]	CHOLESTEROL HEMISUCCINATE C₃₁ H₅₀ O₄ WLNARFZDISHUGS-MIXBDBMTSA-N		Interactions Focus chain E [auth A] Focus chain F [auth A] Focus chain H [auth C] Interactions & Density Focus chain E [auth A] Focus chain F [auth A] Focus chain H [auth C]
CL Query on CL Download Ideal Coordinates CCD File SDF format, chain D [auth A] SDF format, chain G [auth B] SDF format, chain I [auth C] MOL2 format, chain D [auth A] MOL2 format, chain G [auth B] MOL2 format, chain I [auth C]	D [auth A], G [auth B], I [auth C]	CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M		Interactions Focus chain D [auth A] Focus chain G [auth B] Focus chain I [auth C] Interactions & Density Focus chain D [auth A] Focus chain G [auth B] Focus chain I [auth C]

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 3.30 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2023-11-15

Deposition Author(s):

Lee, Y.

Lee, S.

Funding Organization	Location	Grant Number
National Research Foundation (NRF, Korea)	Korea, Republic Of	2022R1A2C100988211
National Research Foundation (NRF, Korea)	Korea, Republic Of	2021M3A9I4022936
National Research Foundation (NRF, Korea)	Korea, Republic Of	2020M3A9E4039217
National Research Foundation (NRF, Korea)	Korea, Republic Of	2017R1A5A1014560

Revision History (Full details and data files)

Version 1.0: 2023-11-15
Type: Initial release

Prepare Data

Validate Data

Deposit Data

Help and Resources

8GW6

AtSLAC1 6D mutant in closed state

Cryo-EM structures of the plant anion channel SLAC1 from Arabidopsis thaliana suggest a combined activation model

Entity ID: 1

UniProt

Entity Groups

Sequence Annotations

Expand

Experimental Data

Structure Validation

Deposition Data

Revision History (Full details and data files)