8VG6 | pdb_00008vg6

Structure of Tulane virus

PDB DOI: https://doi.org/10.2210/pdb8VG6/pdb
EM Map EMD-8252: EMDB EMDataResource

Classification: VIRUS
Organism(s): Tulane virus
Expression System: Platyrrhini
Mutation(s): No

Deposited: 2023-12-22 Released: 2024-12-25
Deposition Author(s): Yu, G., Li, K., Jiang, W.
Funding Organization(s): National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)

Experimental Data Snapshot

Method: ELECTRON MICROSCOPY
Resolution: 2.60 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

wwPDB Validation 3D Report Full Report

This is version 1.1 of the entry. See complete history.

Literature

Structure of Tulane virus

Yu, G., Li, K., Jiang, W.

To be published.

Macromolecule Content

Total Structure Weight: 173.67 kDa
Atom Count: 11,724
Modeled Residue Count: 1,541
Deposited Residue Count: 1,602
Unique protein chains: 1

Macromolecules

Find similar proteins by:

(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Capsid protein	A, B, C	534	Tulane virus	Mutation(s): 0
UniProt
Find proteins for B2Y6D0 (Tulane virus) Explore B2Y6D0 Go to UniProtKB: B2Y6D0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt Group	B2Y6D0
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: ELECTRON MICROSCOPY
Resolution: 2.60 Å
Aggregation State: PARTICLE
Reconstruction Method: SINGLE PARTICLE

EM Software:

Task	Software Package	Version
MODEL REFINEMENT	PHENIX

Structure Validation

View Full Validation Report

Entry History & Funding Information

Deposition Data

Released Date: 2024-12-25

Deposition Author(s):

Funding Organization	Location	Grant Number
National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)	United States	AI111095

Revision History (Full details and data files)

Version 1.0: 2024-12-25
Type: Initial release
Version 1.1: 2025-05-14
Changes: Data collection

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.