8VRX

Bile salt hydrolase from Arthrobacter citreus

PDB DOI: https://doi.org/10.2210/pdb8VRX/pdb
Entry: 8VRX supersedes: 8U7N

Classification: HYDROLASE
Organism(s): Arthrobacter citreus
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2024-01-22 Released: 2024-02-07
Deposition Author(s): Ruzzini, A., Dhindwal, P.
Funding Organization(s): Natural Sciences and Engineering Research Council (NSERC, Canada)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.04 Å
R-Value Free: 0.172
R-Value Work: 0.133
R-Value Observed: 0.135

Starting Model: experimental
View more details

wwPDB Validation 3D Report Full Report

This is version 1.0 of the entry. See complete history.

Literature

Bile salt hydrolase from Arthrobacter citreus

Ruzzini, A., Dhindwal, P.

To be published.

Macromolecule Content

Total Structure Weight: 72.26 kDa
Atom Count: 5,735
Modelled Residue Count: 633
Deposited Residue Count: 644
Unique protein chains: 1

Macromolecules

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(by identity cutoff) | 3D Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Bile Salt Hydrolase	A, B	322	Arthrobacter citreus	Mutation(s): 0
Entity Groups
Sequence Clusters	30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations Expand
Reference Sequence

Small Molecules

Ligands 5 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram	3D Interactions
TRS Query on TRS Download Ideal Coordinates CCD File SDF format, chain G [auth A] MOL2 format, chain G [auth A]	G [auth A]	2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C₄ H₁₂ N O₃ LENZDBCJOHFCAS-UHFFFAOYSA-O		Interactions Focus chain G [auth A] Interactions & Density Focus chain G [auth A]
PEG Query on PEG Download Ideal Coordinates CCD File SDF format, chain I [auth A] SDF format, chain J [auth A] SDF format, chain K [auth A] SDF format, chain T [auth B] SDF format, chain X [auth B] MOL2 format, chain I [auth A] MOL2 format, chain J [auth A] MOL2 format, chain K [auth A] MOL2 format, chain T [auth B] MOL2 format, chain X [auth B]	I [auth A], J [auth A], K [auth A], T [auth B], X [auth B]	DI(HYDROXYETHYL)ETHER C₄ H₁₀ O₃ MTHSVFCYNBDYFN-UHFFFAOYSA-N		Interactions Focus chain I [auth A] Focus chain J [auth A] Focus chain K [auth A] Focus chain T [auth B] Focus chain X [auth B] Interactions & Density Focus chain I [auth A] Focus chain J [auth A] Focus chain K [auth A] Focus chain T [auth B] Focus chain X [auth B]
GOL Query on GOL Download Ideal Coordinates CCD File SDF format, chain R [auth B] SDF format, chain S [auth B] SDF format, chain V [auth B] SDF format, chain W [auth B] MOL2 format, chain R [auth B] MOL2 format, chain S [auth B] MOL2 format, chain V [auth B] MOL2 format, chain W [auth B]	R [auth B], S [auth B], V [auth B], W [auth B]	GLYCEROL C₃ H₈ O₃ PEDCQBHIVMGVHV-UHFFFAOYSA-N		Interactions Focus chain R [auth B] Focus chain S [auth B] Focus chain V [auth B] Focus chain W [auth B] Interactions & Density Focus chain R [auth B] Focus chain S [auth B] Focus chain V [auth B] Focus chain W [auth B]
EDO Query on EDO Download Ideal Coordinates CCD File SDF format, chain D [auth A] SDF format, chain F [auth A] SDF format, chain H [auth A] SDF format, chain L [auth A] SDF format, chain N [auth A] SDF format, chain O [auth A] SDF format, chain P [auth A] SDF format, chain U [auth B] MOL2 format, chain D [auth A] MOL2 format, chain F [auth A] MOL2 format, chain H [auth A] MOL2 format, chain L [auth A] MOL2 format, chain N [auth A] MOL2 format, chain O [auth A] MOL2 format, chain P [auth A] MOL2 format, chain U [auth B]	D [auth A] F [auth A] H [auth A] L [auth A] N [auth A] D [auth A], F [auth A], H [auth A], L [auth A], N [auth A], O [auth A], P [auth A], U [auth B]	1,2-ETHANEDIOL C₂ H₆ O₂ LYCAIKOWRPUZTN-UHFFFAOYSA-N		Interactions Focus chain D [auth A] Focus chain F [auth A] Focus chain H [auth A] Focus chain L [auth A] Focus chain N [auth A] Focus chain O [auth A] Focus chain P [auth A] Focus chain U [auth B] Interactions & Density Focus chain D [auth A] Focus chain F [auth A] Focus chain H [auth A] Focus chain L [auth A] Focus chain N [auth A] Focus chain O [auth A] Focus chain P [auth A] Focus chain U [auth B]
MG Query on MG Download Ideal Coordinates CCD File SDF format, chain C [auth A] SDF format, chain E [auth A] SDF format, chain M [auth A] SDF format, chain Q [auth B] MOL2 format, chain C [auth A] MOL2 format, chain E [auth A] MOL2 format, chain M [auth A] MOL2 format, chain Q [auth B]	C [auth A], E [auth A], M [auth A], Q [auth B]	MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N		Interactions Focus chain C [auth A] Focus chain E [auth A] Focus chain M [auth A] Focus chain Q [auth B] Interactions & Density Focus chain C [auth A] Focus chain E [auth A] Focus chain M [auth A] Focus chain Q [auth B]