8ZXD

the Planar Cell Polarity Core Protein Vangl1


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

the Planar Cell Polarity Core Protein Vangl1

Zhang, F.Chen, S.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Vang-like protein 1
A, B, C, D, E
A, B, C, D, E, F
524Homo sapiensMutation(s): 0 
Gene Names: VANGL1STB2
Membrane Entity: Yes 
UniProt & NIH Common Fund Data Resources
Find proteins for Q8TAA9 (Homo sapiens)
Explore Q8TAA9 
Go to UniProtKB:  Q8TAA9
PHAROS:  Q8TAA9
GTEx:  ENSG00000173218 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ8TAA9
Sequence Annotations
Expand
  • Reference Sequence
Small Molecules
Ligands 2 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
MC3 (Subject of Investigation/LOI)
Query on MC3

Download Ideal Coordinates CCD File 
H [auth A]
K [auth B]
O [auth C]
Q [auth D]
T [auth E]
H [auth A],
K [auth B],
O [auth C],
Q [auth D],
T [auth E],
X [auth F]
1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE
C36 H72 N O8 P
CITHEXJVPOWHKC-UUWRZZSWSA-N
Y01 (Subject of Investigation/LOI)
Query on Y01

Download Ideal Coordinates CCD File 
G [auth A]
I [auth A]
J [auth B]
L [auth B]
M [auth C]
G [auth A],
I [auth A],
J [auth B],
L [auth B],
M [auth C],
N [auth C],
P [auth D],
R [auth D],
S [auth E],
U [auth E],
V [auth F],
W [auth F]
CHOLESTEROL HEMISUCCINATE
C31 H50 O4
WLNARFZDISHUGS-MIXBDBMTSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.90 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Natural Science Foundation of China (NSFC)China82101213

Revision History  (Full details and data files)

  • Version 1.0: 2024-11-27
    Type: Initial release