9EQK

WWP1 WW2-2,3-linker-WW3-WW4-HECT (WWP1-2L34H) with ordered WW2 domain

• PDB DOI: https://doi.org/10.2210/pdb9EQK/pdb

• Classification: LIGASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2024-03-21 Released: 2024-05-15 
• Deposition Author(s): Dudey, A.P., Hemmings, A.M.
• Funding Organization(s): Other private

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 3.00 Å
• R-Value Free: 0.274 
• R-Value Work: 0.205 
• R-Value Observed: 0.209 

Starting Model: experimental

Literature

Expanding the Inhibitor Space of the WWP1 and WWP2 HECT E3 Ligases

Dudey, A.P., Rigby, J.M., Hughes, G.R., Stephenson, G.R., Storr, T.E., Chantry, A., Hemmings, A.M.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Biological Assembly Evidence: gel filtration

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors.

Macromolecule Content

• Total Structure Weight: 130.14 kDa 
• Atom Count: 8,678 
• Modelled Residue Count: 1,056 
• Deposited Residue Count: 1,100 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
NEDD4-like E3 ubiquitin-protein ligase WWP1	A, B	550	Homo sapiens	Mutation(s): 0  Gene Names: WWP1 EC: 2.3.2.26
UniProt & NIH Common Fund Data Resources
Find proteins for Q9H0M0 (Homo sapiens) Explore Q9H0M0  Go to UniProtKB:  Q9H0M0
GTEx:  ENSG00000123124

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 3.00 Å
• R-Value Free: 0.274 
• R-Value Work: 0.205 
• R-Value Observed: 0.209 
• Space Group: C 1 2 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 226.984	α = 90
b = 59.719	β = 99.41
c = 108.258	γ = 90

Software Package:

Software Name	Purpose
PHENIX	refinement
autoPROC	data reduction
autoPROC	data scaling
PHASER	phasing

Structure Validation

Entry History & Funding Information

Deposition Data

• Released Date: 2024-05-15 
Deposition Author(s): Dudey, A.P., Hemmings, A.M.

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Funding Organization	Location	Grant Number
Other private	United Kingdom	Research Grant 19-14R

Revision History  

• Version 1.0: 2024-05-15
  Type: Initial release