9GD5 | pdb_00009gd5

Crystal structure of apo TRIM24 PHD-BRD in C121 space group


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free: 
    0.240 (Depositor), 0.241 (DCC) 
  • R-Value Work: 
    0.210 (Depositor), 0.211 (DCC) 

Starting Model: experimental
View more details

wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Crystal structure of apo TRIM24 PHD-BRD in C121 space group

Platt, M.A.Kot, E.Conway, S.J.Koekemoer, L.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Transcription intermediary factor 1-alpha
A, B
185Homo sapiensMutation(s): 0 
Gene Names: TRIM24RNF82TIF1TIF1A
EC: 2.3.2.27
UniProt & NIH Common Fund Data Resources
Find proteins for O15164 (Homo sapiens)
Explore O15164 
Go to UniProtKB:  O15164
PHAROS:  O15164
GTEx:  ENSG00000122779 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupO15164
Sequence Annotations
Expand
  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free:  0.240 (Depositor), 0.241 (DCC) 
  • R-Value Work:  0.210 (Depositor), 0.211 (DCC) 
Space Group: C 1 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 88.9α = 90
b = 36.907β = 110.044
c = 129.363γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
xia2data reduction
xia2data scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Biotechnology and Biological Sciences Research Council (BBSRC)United KingdomBB/T008784/1

Revision History  (Full details and data files)

  • Version 1.0: 2025-08-13
    Type: Initial release