9KB1 | pdb_00009kb1

The Structure of the Carbohydrate Deacetylase PpOngB from Pseudoalteromonas prydzensis ACAM 620.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.77 Å
  • R-Value Free: 
    0.199 (Depositor), 0.199 (DCC) 
  • R-Value Work: 
    0.172 (Depositor), 0.172 (DCC) 

Starting Model: in silico
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wwPDB Validation   3D Report Full Report


This is version 1.0 of the entry. See complete history


Literature

Structure of the wild-type PpOngB

Wang, J.P.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
PpOngB489Pseudoalteromonas prydzensis ACAM 620Mutation(s): 0 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.77 Å
  • R-Value Free:  0.199 (Depositor), 0.199 (DCC) 
  • R-Value Work:  0.172 (Depositor), 0.172 (DCC) 
Space Group: P 31 2 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 87.597α = 90
b = 87.597β = 90
c = 143.319γ = 120
Software Package:
Software NamePurpose
HKL-3000data collection
PDB_EXTRACTdata extraction
autoPROCdata processing
PHENIXrefinement
HKL-3000data reduction
HKL-3000data scaling
PHENIXphasing

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Science Foundation (NSF, China)China--

Revision History  (Full details and data files)

  • Version 1.0: 2025-03-19
    Type: Initial release