5UOT

CryoEM structure of the helical assembly of full length MxB


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.60 Å
  • Aggregation State: HELICAL ARRAY 
  • Reconstruction Method: HELICAL 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

CryoEM structure of MxB reveals a novel oligomerization interface critical for HIV restriction.

Alvarez, F.J.D.He, S.Perilla, J.R.Jang, S.Schulten, K.Engelman, A.N.Scheres, S.H.W.Zhang, P.

(2017) Sci Adv 3: e1701264-e1701264

  • DOI: https://doi.org/10.1126/sciadv.1701264
  • Primary Citation of Related Structures:  
    5UOT

  • PubMed Abstract: 

    Human dynamin-like, interferon-induced myxovirus resistance 2 (Mx2 or MxB) is a potent HIV-1 inhibitor. Antiviral activity requires both the amino-terminal region of MxB and protein oligomerization, each of which has eluded structural determination due to difficulties in protein preparation. We report that maltose binding protein-fused, full-length wild-type MxB purifies as oligomers and further self-assembles into helical arrays in physiological salt. Guanosine triphosphate (GTP), but not guanosine diphosphate, binding results in array disassembly, whereas subsequent GTP hydrolysis allows its reformation. Using cryo-electron microscopy (cryoEM), we determined the MxB assembly structure at 4.6 Å resolution, representing the first near-atomic resolution structure in the mammalian dynamin superfamily. The structure revealed previously described and novel MxB assembly interfaces. Mutational analyses demonstrated a critical role for one of the novel interfaces in HIV-1 restriction.


  • Organizational Affiliation

    Department of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, PA 15260, USA.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Interferon-induced GTP-binding protein Mx2619Homo sapiensMutation(s): 0 
Gene Names: MX2
UniProt & NIH Common Fund Data Resources
Find proteins for P20592 (Homo sapiens)
Explore P20592 
Go to UniProtKB:  P20592
PHAROS:  P20592
GTEx:  ENSG00000183486 
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP20592
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 4.60 Å
  • Aggregation State: HELICAL ARRAY 
  • Reconstruction Method: HELICAL 
EM Software:
TaskSoftware PackageVersion
MODEL REFINEMENTMDFF3.0
RECONSTRUCTIONRELION2.0 beta

Structure Validation

View Full Validation Report



Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
National Institutes of HealthUnited StatesGM082251, GM085043, GM104601, GM067887, AI039394
Medical Research Council (United Kingdom)United KingdomMC_UP_A025_1013
National Science FoundationUnited StatesOCI 07-25070, ACI-1238993

Revision History  (Full details and data files)

  • Version 1.0: 2018-02-21
    Type: Initial release
  • Version 1.1: 2018-10-24
    Changes: Data collection, Database references, Other
  • Version 1.2: 2019-01-23
    Changes: Data collection, Refinement description