6SGC

Rabbit 80S ribosome stalled on a poly(A) tail


Experimental Data Snapshot

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Mechanism of ribosome stalling during translation of a poly(A) tail.

Chandrasekaran, V.Juszkiewicz, S.Choi, J.Puglisi, J.D.Brown, A.Shao, S.Ramakrishnan, V.Hegde, R.S.

(2019) Nat Struct Mol Biol 26: 1132-1140

  • DOI: https://doi.org/10.1038/s41594-019-0331-x
  • Primary Citation of Related Structures:  
    6SGC

  • PubMed Abstract: 

    Faulty or damaged messenger RNAs are detected by the cell when translating ribosomes stall during elongation and trigger pathways of mRNA decay, nascent protein degradation and ribosome recycling. The most common mRNA defect in eukaryotes is probably inappropriate polyadenylation at near-cognate sites within the coding region. How ribosomes stall selectively when they encounter poly(A) is unclear. Here, we use biochemical and structural approaches in mammalian systems to show that poly-lysine, encoded by poly(A), favors a peptidyl-transfer RNA conformation suboptimal for peptide bond formation. This conformation partially slows elongation, permitting poly(A) mRNA in the ribosome's decoding center to adopt a ribosomal RNA-stabilized single-stranded helix. The reconfigured decoding center clashes with incoming aminoacyl-tRNA, thereby precluding elongation. Thus, coincidence detection of poly-lysine in the exit tunnel and poly(A) in the decoding center allows ribosomes to detect aberrant mRNAs selectively, stall elongation and trigger downstream quality control pathways essential for cellular homeostasis.


  • Organizational Affiliation

    MRC Laboratory of Molecular Biology, Cambridge, UK.


Macromolecules

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Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
uS2B [auth B1]295Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 3
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S3aC [auth C1]264Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SS70 (Oryctolagus cuniculus)
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Entity ID: 4
MoleculeChains Sequence LengthOrganismDetailsImage
uS5D [auth D1]293Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 5
MoleculeChains Sequence LengthOrganismDetailsImage
uS5E [auth E1]243Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TNM3 (Oryctolagus cuniculus)
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Entity ID: 6
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S4F [auth F1]263Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TK17 (Oryctolagus cuniculus)
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Entity ID: 7
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein S5G [auth G1]204Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TFM5 (Oryctolagus cuniculus)
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Entity ID: 8
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S6H [auth H1]249Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TM55 (Oryctolagus cuniculus)
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Entity ID: 9
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S7I [auth I1]194Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1SVB0 (Oryctolagus cuniculus)
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Entity ID: 10
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S8J [auth J1]208Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TJW1 (Oryctolagus cuniculus)
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Entity ID: 11
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein S9 (Predicted)K [auth K1]194Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 12
MoleculeChains Sequence LengthOrganismDetailsImage
S10_plectin domain-ontaining proteinL [auth L1]165Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TPV3 (Oryctolagus cuniculus)
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Entity ID: 13
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein S11M [auth M1]158Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TRM4 (Oryctolagus cuniculus)
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Entity ID: 14
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S12N [auth N1]132Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1SFR8 (Oryctolagus cuniculus)
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Entity ID: 15
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal_S13_N domain-containing proteinO [auth O1]151Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1SP51 (Oryctolagus cuniculus)
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Entity ID: 16
MoleculeChains Sequence LengthOrganismDetailsImage
uS11P [auth P1]168Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 17
MoleculeChains Sequence LengthOrganismDetailsImage
uS19Q [auth Q1]145Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1U0Q2 (Oryctolagus cuniculus)
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Entity ID: 18
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein S16R [auth R1]146Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SGX4 (Oryctolagus cuniculus)
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Entity ID: 19
MoleculeChains Sequence LengthOrganismDetailsImage
eS17S [auth S1]135Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TU13 (Oryctolagus cuniculus)
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Entity ID: 20
MoleculeChains Sequence LengthOrganismDetailsImage
eS13T [auth T1]152Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TPG3 (Oryctolagus cuniculus)
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Entity ID: 21
MoleculeChains Sequence LengthOrganismDetailsImage
eS19U [auth U1]145Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TN62 (Oryctolagus cuniculus)
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Entity ID: 22
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal_S10 domain-containing proteinV [auth V1]119Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1SIZ2 (Oryctolagus cuniculus)
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Entity ID: 23
MoleculeChains Sequence LengthOrganismDetailsImage
eS21W [auth W1]83Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 24
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein S15aX [auth X1]130Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TG89 (Oryctolagus cuniculus)
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Entity ID: 25
MoleculeChains Sequence LengthOrganismDetailsImage
uS12Y [auth Y1]143Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 26
MoleculeChains Sequence LengthOrganismDetailsImage
eS24Z [auth Z1]130Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 27
MoleculeChains Sequence LengthOrganismDetailsImage
eS25AA [auth a1]125Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TDB3 (Oryctolagus cuniculus)
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Entity ID: 28
MoleculeChains Sequence LengthOrganismDetailsImage
eS26BA [auth b1]115Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 29
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S27CA [auth c1]84Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TZ76 (Oryctolagus cuniculus)
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Entity ID: 30
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein S28DA [auth d1]69Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TIB4 (Oryctolagus cuniculus)
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Entity ID: 31
MoleculeChains Sequence LengthOrganismDetailsImage
uS14EA [auth e1]56Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1U7M4 (Oryctolagus cuniculus)
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Entity ID: 32
MoleculeChains Sequence LengthOrganismDetailsImage
40S ribosomal protein S30FA [auth f1]133Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1T8A2 (Oryctolagus cuniculus)
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Entity ID: 33
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein S27aGA [auth g1]156Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1SK22 (Oryctolagus cuniculus)
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Entity ID: 34
MoleculeChains Sequence LengthOrganismDetailsImage
WD_REPEATS_REGION domain-containing proteinHA [auth h1]317Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1SJB4 (Oryctolagus cuniculus)
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Entity ID: 36
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L8JA [auth A2]257Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TT27 (Oryctolagus cuniculus)
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Entity ID: 37
MoleculeChains Sequence LengthOrganismDetailsImage
uL3KA [auth B2]403Oryctolagus cuniculusMutation(s): 0 
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Find proteins for G1TL06 (Oryctolagus cuniculus)
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Entity ID: 38
MoleculeChains Sequence LengthOrganismDetailsImage
uL4LA [auth C2]425Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 39
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L5MA [auth D2]297Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 40
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L6NA [auth E2]291Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 41
MoleculeChains Sequence LengthOrganismDetailsImage
uL30OA [auth F2]247Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 42
MoleculeChains Sequence LengthOrganismDetailsImage
eL8PA [auth G2]319Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 43
MoleculeChains Sequence LengthOrganismDetailsImage
uL6QA [auth H2]192Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SWI6 (Oryctolagus cuniculus)
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Entity ID: 44
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L10RA [auth I2]214Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 45
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L11SA [auth J2]178Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TUB8 (Oryctolagus cuniculus)
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Entity ID: 46
MoleculeChains Sequence LengthOrganismDetailsImage
eL13TA [auth L2]211Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 47
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L14UA [auth M2]218Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SZ12 (Oryctolagus cuniculus)
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Entity ID: 48
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L15VA [auth N2]204Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1T0C1 (Oryctolagus cuniculus)
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Entity ID: 49
MoleculeChains Sequence LengthOrganismDetailsImage
uL13WA [auth O2]203Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 50
MoleculeChains Sequence LengthOrganismDetailsImage
uL22XA [auth P2]184Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TVT6 (Oryctolagus cuniculus)
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Entity ID: 51
MoleculeChains Sequence LengthOrganismDetailsImage
eL18YA [auth Q2]188Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 52
MoleculeChains Sequence LengthOrganismDetailsImage
eL19ZA [auth R2]196Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 53
MoleculeChains Sequence LengthOrganismDetailsImage
eL20AB [auth S2]176Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 54
MoleculeChains Sequence LengthOrganismDetailsImage
eL21BB [auth T2]160Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SHQ2 (Oryctolagus cuniculus)
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Entity ID: 55
MoleculeChains Sequence LengthOrganismDetailsImage
eL22CB [auth U2]128Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 56
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L23DB [auth V2]140Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1T6D1 (Oryctolagus cuniculus)
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Entity ID: 57
MoleculeChains Sequence LengthOrganismDetailsImage
TRASH domain-containing proteinEB [auth W2]157Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 58
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal_L23eN domain-containing proteinFB [auth X2]156Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 59
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L26GB [auth Y2]145Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SQH0 (Oryctolagus cuniculus)
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Entity ID: 60
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L27HB [auth Z2]136Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TXF6 (Oryctolagus cuniculus)
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Entity ID: 61
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal_L18e/L15P domain-containing proteinIB [auth a2]148Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SNY0 (Oryctolagus cuniculus)
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Entity ID: 62
MoleculeChains Sequence LengthOrganismDetailsImage
eL29JB [auth b2]245Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 63
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal_L7Ae domain-containing proteinKB [auth c2]115Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1TDL2 (Oryctolagus cuniculus)
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Entity ID: 64
MoleculeChains Sequence LengthOrganismDetailsImage
eL31LB [auth d2]125Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 65
MoleculeChains Sequence LengthOrganismDetailsImage
eL32MB [auth e2]135Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1U437 (Oryctolagus cuniculus)
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Entity ID: 66
MoleculeChains Sequence LengthOrganismDetailsImage
eL33NB [auth f2]110Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SF08 (Oryctolagus cuniculus)
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Entity ID: 67
MoleculeChains Sequence LengthOrganismDetailsImage
eL34OB [auth g2]116Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1U945 (Oryctolagus cuniculus)
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Entity ID: 68
MoleculeChains Sequence LengthOrganismDetailsImage
uL29PB [auth h2]123Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SIT5 (Oryctolagus cuniculus)
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Entity ID: 69
MoleculeChains Sequence LengthOrganismDetailsImage
60S ribosomal protein L36QB [auth i2]105Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 70
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L37RB [auth j2]97Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 71
MoleculeChains Sequence LengthOrganismDetailsImage
eL38SB [auth k2]70Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 72
MoleculeChains Sequence LengthOrganismDetailsImage
eL39TB [auth l2]51Oryctolagus cuniculusMutation(s): 0 
UniProt
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Entity ID: 73
MoleculeChains Sequence LengthOrganismDetailsImage
eL40UB [auth m2]102Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 74
MoleculeChains Sequence LengthOrganismDetailsImage
60s ribosomal protein l41VB [auth n2]25Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for A0A087WNH4 (Oryctolagus cuniculus)
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Entity ID: 75
MoleculeChains Sequence LengthOrganismDetailsImage
eL42WB [auth o2]106Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1U344 (Oryctolagus cuniculus)
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Entity ID: 76
MoleculeChains Sequence LengthOrganismDetailsImage
eL43XB [auth p2]92Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SY53 (Oryctolagus cuniculus)
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Entity ID: 77
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal_L28e domain-containing proteinYB [auth r2]137Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1U7L1 (Oryctolagus cuniculus)
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Entity ID: 78
MoleculeChains Sequence LengthOrganismDetailsImage
uL10ZB [auth s2]318Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 79
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal protein L12AC [auth t2]165Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SMR7 (Oryctolagus cuniculus)
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Entity ID: 83
MoleculeChains Sequence LengthOrganismDetailsImage
poly-lysine nascent chainEC [auth XX]16Oryctolagus cuniculusMutation(s): 0 
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Entity ID: 84
MoleculeChains Sequence LengthOrganismDetailsImage
Ribosomal proteinFC [auth B]217Oryctolagus cuniculusMutation(s): 0 
UniProt
Find proteins for G1SKZ8 (Oryctolagus cuniculus)
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Entity ID: 1
MoleculeChains LengthOrganismImage
18S ribosomal RNAA [auth A1]1,869Oryctolagus cuniculus
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Entity ID: 35
MoleculeChains LengthOrganismImage
polyA mRNAIA [auth i1]10Homo sapiens
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Entity ID: 80
MoleculeChains LengthOrganismImage
28S ribosomal RNABC [auth 54]3,603Oryctolagus cuniculus
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Entity ID: 81
MoleculeChains LengthOrganismImage
5S ribosomal RNACC [auth 74]120Oryctolagus cuniculus
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Entity ID: 82
MoleculeChains LengthOrganismImage
5.8S ribosomal RNADC [auth 84]156Oryctolagus cuniculus
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Entity ID: 85
MoleculeChains LengthOrganismImage
tRNA (Lys3)GC [auth 23],
HC [auth 33]
76Oryctolagus cuniculus
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Small Molecules
Ligands 3 Unique
IDChains Name / Formula / InChI Key2D Diagram3D Interactions
SPD
Query on SPD

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UM [auth 54],
VM [auth 54]
SPERMIDINE
C7 H19 N3
ATHGHQPFGPMSJY-UHFFFAOYSA-N
ZN
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AF [auth b1]
BF [auth e1]
CF [auth g1]
MF [auth g2]
OF [auth j2]
AF [auth b1],
BF [auth e1],
CF [auth g1],
MF [auth g2],
OF [auth j2],
RF [auth m2],
SF [auth o2],
TF [auth p2]
ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
MG
Query on MG

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AD [auth A1]
AE [auth A1]
AG [auth 54]
AH [auth 54]
AI [auth 54]
AD [auth A1],
AE [auth A1],
AG [auth 54],
AH [auth 54],
AI [auth 54],
AJ [auth 54],
AK [auth 54],
AL [auth 54],
AM [auth 54],
AN [auth 74],
BD [auth A1],
BE [auth A1],
BG [auth 54],
BH [auth 54],
BI [auth 54],
BJ [auth 54],
BK [auth 54],
BL [auth 54],
BM [auth 54],
BN [auth 74],
CD [auth A1],
CE [auth A1],
CG [auth 54],
CH [auth 54],
CI [auth 54],
CJ [auth 54],
CK [auth 54],
CL [auth 54],
CM [auth 54],
CN [auth 84],
DD [auth A1],
DE [auth A1],
DF [auth A2],
DG [auth 54],
DH [auth 54],
DI [auth 54],
DJ [auth 54],
DK [auth 54],
DL [auth 54],
DM [auth 54],
DN [auth 84],
ED [auth A1],
EE [auth A1],
EF [auth B2],
EG [auth 54],
EH [auth 54],
EI [auth 54],
EJ [auth 54],
EK [auth 54],
EL [auth 54],
EM [auth 54],
EN [auth 84],
FD [auth A1],
FE [auth A1],
FF [auth I2],
FG [auth 54],
FH [auth 54],
FI [auth 54],
FJ [auth 54],
FK [auth 54],
FL [auth 54],
FM [auth 54],
FN [auth 84],
GD [auth A1],
GE [auth A1],
GF [auth P2],
GG [auth 54],
GH [auth 54],
GI [auth 54],
GJ [auth 54],
GK [auth 54],
GL [auth 54],
GM [auth 54],
GN [auth 84],
HD [auth A1],
HE [auth A1],
HF [auth Q2],
HG [auth 54],
HH [auth 54],
HI [auth 54],
HJ [auth 54],
HK [auth 54],
HL [auth 54],
HM [auth 54],
IC [auth A1],
ID [auth A1],
IE [auth A1],
IF [auth V2],
IG [auth 54],
IH [auth 54],
II [auth 54],
IJ [auth 54],
IK [auth 54],
IL [auth 54],
IM [auth 54],
JC [auth A1],
JD [auth A1],
JE [auth A1],
JF [auth a2],
JG [auth 54],
JH [auth 54],
JI [auth 54],
JJ [auth 54],
JK [auth 54],
JL [auth 54],
JM [auth 54],
KC [auth A1],
KD [auth A1],
KE [auth A1],
KF [auth a2],
KG [auth 54],
KH [auth 54],
KI [auth 54],
KJ [auth 54],
KK [auth 54],
KL [auth 54],
KM [auth 54],
LC [auth A1],
LD [auth A1],
LE [auth A1],
LF [auth e2],
LG [auth 54],
LH [auth 54],
LI [auth 54],
LJ [auth 54],
LK [auth 54],
LL [auth 54],
LM [auth 54],
MC [auth A1],
MD [auth A1],
ME [auth A1],
MG [auth 54],
MH [auth 54],
MI [auth 54],
MJ [auth 54],
MK [auth 54],
ML [auth 54],
MM [auth 54],
NC [auth A1],
ND [auth A1],
NE [auth A1],
NF [auth g2],
NG [auth 54],
NH [auth 54],
NI [auth 54],
NJ [auth 54],
NK [auth 54],
NL [auth 54],
NM [auth 54],
OC [auth A1],
OD [auth A1],
OE [auth A1],
OG [auth 54],
OH [auth 54],
OI [auth 54],
OJ [auth 54],
OK [auth 54],
OL [auth 54],
OM [auth 54],
PC [auth A1],
PD [auth A1],
PE [auth A1],
PF [auth j2],
PG [auth 54],
PH [auth 54],
PI [auth 54],
PJ [auth 54],
PK [auth 54],
PL [auth 54],
PM [auth 54],
QC [auth A1],
QD [auth A1],
QE [auth A1],
QF [auth j2],
QG [auth 54],
QH [auth 54],
QI [auth 54],
QJ [auth 54],
QK [auth 54],
QL [auth 54],
QM [auth 54],
RC [auth A1],
RD [auth A1],
RE [auth A1],
RG [auth 54],
RH [auth 54],
RI [auth 54],
RJ [auth 54],
RK [auth 54],
RL [auth 54],
RM [auth 54],
SC [auth A1],
SD [auth A1],
SE [auth A1],
SG [auth 54],
SH [auth 54],
SI [auth 54],
SJ [auth 54],
SK [auth 54],
SL [auth 54],
SM [auth 54],
TC [auth A1],
TD [auth A1],
TE [auth A1],
TG [auth 54],
TH [auth 54],
TI [auth 54],
TJ [auth 54],
TK [auth 54],
TL [auth 54],
TM [auth 54],
UC [auth A1],
UD [auth A1],
UE [auth A1],
UF [auth 54],
UG [auth 54],
UH [auth 54],
UI [auth 54],
UJ [auth 54],
UK [auth 54],
UL [auth 54],
VC [auth A1],
VD [auth A1],
VE [auth A1],
VF [auth 54],
VG [auth 54],
VH [auth 54],
VI [auth 54],
VJ [auth 54],
VK [auth 54],
VL [auth 54],
WC [auth A1],
WD [auth A1],
WE [auth A1],
WF [auth 54],
WG [auth 54],
WH [auth 54],
WI [auth 54],
WJ [auth 54],
WK [auth 54],
WL [auth 54],
WM [auth 74],
XC [auth A1],
XD [auth A1],
XE [auth A1],
XF [auth 54],
XG [auth 54],
XH [auth 54],
XI [auth 54],
XJ [auth 54],
XK [auth 54],
XL [auth 54],
XM [auth 74],
YC [auth A1],
YD [auth A1],
YE [auth A1],
YF [auth 54],
YG [auth 54],
YH [auth 54],
YI [auth 54],
YJ [auth 54],
YK [auth 54],
YL [auth 54],
YM [auth 74],
ZC [auth A1],
ZD [auth A1],
ZE [auth A1],
ZF [auth 54],
ZG [auth 54],
ZH [auth 54],
ZI [auth 54],
ZJ [auth 54],
ZK [auth 54],
ZL [auth 54],
ZM [auth 74]
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Experimental Data & Validation

Experimental Data

  • Method: ELECTRON MICROSCOPY
  • Resolution: 2.80 Å
  • Aggregation State: PARTICLE 
  • Reconstruction Method: SINGLE PARTICLE 
EM Software:
TaskSoftware PackageVersion
RECONSTRUCTIONRELION3.0
MODEL REFINEMENTPHENIX

Structure Validation

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Entry History & Funding Information

Deposition Data


Funding OrganizationLocationGrant Number
Medical Research Council (United Kingdom)United KingdomMC_UP_A022_1007
Medical Research Council (United Kingdom)United KingdomMC_U105184332
Wellcome TrustUnited KingdomWT096570
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM51266
National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)United StatesGM113078

Revision History  (Full details and data files)

  • Version 1.0: 2019-12-04
    Type: Initial release
  • Version 1.1: 2019-12-18
    Changes: Database references
  • Version 1.2: 2022-03-30
    Changes: Author supporting evidence, Database references