1BUN

STRUCTURE OF BETA2-BUNGAROTOXIN: POTASSIUM CHANNEL BINDING BY KUNITZ MODULES AND TARGETED PHOSPHOLIPASE ACTION


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyVertebrate phospholipase A28026682 4001493 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyPhospholipase A2 PLA28039061 3001690 SCOP2 (2022-06-29)
BSCOP2 FamilySmall Kunitz-type inhibitors & BPTI-like toxins8026174 4003337 SCOP2 (2022-06-29)
BSCOP2 SuperfamilyBPTI-like8038553 3000628 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00068e1bunA1 A: few secondary structure elementsX: Phospholipase A2, PLA2 (From Topology)H: Phospholipase A2, PLA2 (From Topology)T: Phospholipase A2, PLA2F: PF00068ECOD (1.6)
BPF00014e1bunB1 A: few secondary structure elementsX: BPTI-like (From Topology)H: BPTI-like (From Topology)T: BPTI-likeF: PF00014ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A1.20.90.10 Mainly Alpha Up-down Bundle Phospholipase A2 Phospholipase A2 domainCATH (4.3.0)
B4.10.410.10 Few Secondary Structures Irregular Factor Xa Inhibitor Pancreatic trypsin inhibitor Kunitz domainCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00068Phospholipase A2 (Phospholip_A2_1)Phospholipase A2Phospholipase A2 releases fatty acids from the second carbon group of glycerol. Perhaps the best known members are secreted snake venoms, but also found in secreted pancreatic and membrane-associated forms. Structure is all-alpha, with two core disul ...Phospholipase A2 releases fatty acids from the second carbon group of glycerol. Perhaps the best known members are secreted snake venoms, but also found in secreted pancreatic and membrane-associated forms. Structure is all-alpha, with two core disulfide-linked helices and a calcium-binding loop. This alignment represents the major family of PLA2s. A second minor family, defined by the honeybee venom PLA2 PDB:1POC and related sequences from Gila monsters (Heloderma), is not recognised. This minor family conserves the core helix pair but is substantially different elsewhere. The PROSITE pattern PA2_HIS, specific to the first core helix, recognises both families.
Domain
PF00014Kunitz/Bovine pancreatic trypsin inhibitor domain (Kunitz_BPTI)Kunitz/Bovine pancreatic trypsin inhibitor domainIndicative of a protease inhibitor, usually a serine protease inhibitor. Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure. Certain family members are similar to the ...Indicative of a protease inhibitor, usually a serine protease inhibitor. Structure is a disulfide rich alpha+beta fold. BPTI (bovine pancreatic trypsin inhibitor) is an extensively studied model structure. Certain family members are similar to the tick anticoagulant peptide (TAP, Swiss:P17726). This is a highly selective inhibitor of factor Xa in the blood coagulation pathways [1]. TAP molecules are highly dipolar [2], and are arranged to form a twisted two- stranded antiparallel beta-sheet followed by an alpha helix [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
BETA2-BUNGAROTOXIN
BETA2-BUNGAROTOXIN -