4V47

Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth AH]SCOP2B SuperfamilyRibosomal protein L138096350 3001134 SCOP2B (2022-06-29)
O [auth AM]SCOP2B SuperfamilyTranslational machinery components8032969 3000571 SCOP2B (2022-06-29)
P [auth AN]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096364 3000334 SCOP2B (2022-06-29)
R [auth AQ]SCOP2B SuperfamilyRibosomal protein L228096336 3001078 SCOP2B (2022-06-29)
S [auth AR]SCOP2 FamilyL23p8105777 4000943 SCOP2 (2022-06-29)
S [auth AR]SCOP2 SuperfamilyRibosomal proteins S24e L23 and L15e8105778 3000210 SCOP2 (2022-06-29)
T [auth AS]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8096358 3000334 SCOP2B (2022-06-29)
U [auth AT]SCOP2B SuperfamilyRibosomal protein L25-like8042538 3001161 SCOP2B (2022-06-29)
V [auth AU]SCOP2B SuperfamilyRibosomal L27 protein-like8096338 3000539 SCOP2B (2022-06-29)
W [auth AW]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8096370 3000713 SCOP2B (2022-06-29)
Z [auth A1]SCOP2B SuperfamilyZn-binding ribosomal proteins8096362 3001320 SCOP2B (2022-06-29)
AA [auth A4]SCOP2B SuperfamilyRibosomal protein L368035391 3001346 SCOP2B (2022-06-29)
C [auth AA]SCOP2B SuperfamilyNucleic acid-binding proteins8035394 3000135 SCOP2B (2022-06-29)
C [auth AA]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8035393 3000334 SCOP2B (2022-06-29)
DA [auth BD]SCOP2 FamilyRibosomal protein S48083399 4001399 SCOP2 (2022-06-29)
DA [auth BD]SCOP2 SuperfamilyAlpha-L RNA-binding motif8083400 3001473 SCOP2 (2022-06-29)
FA [auth BF]SCOP2B SuperfamilyRibosomal protein S68066495 3001323 SCOP2B (2022-06-29)
HA [auth BH]SCOP2B SuperfamilyRibosomal protein S88079059 3000709 SCOP2B (2022-06-29)
JA [auth BJ]SCOP2B SuperfamilyRibosomal protein S108102681 3001336 SCOP2B (2022-06-29)
KA [auth BK]SCOP2B SuperfamilyTranslational machinery components8035368 3000571 SCOP2B (2022-06-29)
MA [auth BM]SCOP2B SuperfamilyS13-like H2TH domain8098358 3000053 SCOP2B (2022-06-29)
PA [auth BP]SCOP2B SuperfamilyRibosomal protein S168106547 3000680 SCOP2B (2022-06-29)
QA [auth BQ]SCOP2 FamilyCold shock DNA-binding domain-like8102127 4001909 SCOP2 (2022-06-29)
QA [auth BQ]SCOP2 SuperfamilyNucleic acid-binding proteins8102128 3000135 SCOP2 (2022-06-29)
SA [auth BS]SCOP2B SuperfamilyRibosomal protein S198103915 3000686 SCOP2B (2022-06-29)
F [auth AD]SCOP2B SuperfamilyRL5-like8096352 3001709 SCOP2B (2022-06-29)
H [auth AF]SCOP2B SuperfamilyL9 N-domain-like8032960 3000338 SCOP2B (2022-06-29)
I [auth AG]SCOP2B SuperfamilyRibosomal protein L11 C-terminal domain8032961 3001186 SCOP2B (2022-06-29)
I [auth AG]SCOP2B SuperfamilyRibosomal L11/L12e N-terminal domain-like8032963 3000950 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth AH]Ribosomal_L13e4v47AH1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
K [auth AI]Ribosomal_L14e4v47AI1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
L [auth AJ]Ribosomal_L27Ae4v47AJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
M [auth AK]Ribosomal_L16e4v47AK1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
N [auth AL]Ribosomal_L17_1e4v47AL1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
O [auth AM]Ribosomal_L18pe4v47AM1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
P [auth AN]Ribosomal_L19e4v47AN1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
Q [auth AO]Ribosomal_L20e4v47AO1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
R [auth AQ]Ribosomal_L22e4v47AQ1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth AR]Ribosomal_L23_2e4v47AR1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
T [auth AS]ribosomal_L24_1e4v47AS1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24_1ECOD (1.6)
U [auth AT]Ribosomal_L25pe4v47AT1 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
V [auth AU]Ribosomal_L27e4v47AU1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
W [auth AW]Ribosomal_L29e4v47AW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
X [auth AX]Ribosomal_L30e4v47AX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
Y [auth AZ]Ribosomal_L32pe4v47AZ1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
Z [auth A1]Ribosomal_L33e4v47A11 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
AA [auth A4]Ribosomal_L36e4v47A41 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
CA [auth BC]Ribosomal_S3_Ce4v47BC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
CA [auth BC]KH_2_1e4v47BC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
C [auth AA]Ribosomal_L2e4v47AA1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2ECOD (1.6)
C [auth AA]Ribosomal_L2_Ce4v47AA2 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
DA [auth BD]S4e4v47BD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
EA [auth BE]Ribosomal_S5_Ce4v47BE1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
EA [auth BE]Ribosomal_S5e4v47BE2 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
FA [auth BF]Ribosomal_S6e4v47BF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
GA [auth BG]Ribosomal_S7_1e4v47BG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
HA [auth BH]Ribosomal_S8_Ne4v47BH2 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
HA [auth BH]Ribosomal_S8_Ce4v47BH1 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
IA [auth BI]Ribosomal_S9e4v47BI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
JA [auth BJ]Ribosomal_S10e4v47BJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
KA [auth BK]Ribosomal_S11e4v47BK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
LA [auth BL]Ribosom_S12_S23e4v47BL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
MA [auth BM]Ribosomal_S13_1e4v47BM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
D [auth AB]Ribosomal_L3e4v47AB1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
NA [auth BN]Ribosomal_S14e4v47BN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
OA [auth BO]Ribosomal_S15_1e4v47BO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
PA [auth BP]Ribosomal_S16e4v47BP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16ECOD (1.6)
QA [auth BQ]Ribosomal_S17_1e4v47BQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
RA [auth BR]Ribosomal_S18e4v47BR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
SA [auth BS]Ribosomal_S19e4v47BS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
TA [auth BT]Ribosomal_S20pe4v47BT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
E [auth AC]Ribosomal_L4e4v47AC1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
F [auth AD]Ribosomal_L5_Ce4v47AD1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
G [auth AE]Ribosomal_L6e4v47AE1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
G [auth AE]Ribosomal_L6_1e4v47AE2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
H [auth AF]Ribosomal_L9_Ne4v47AF1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
I [auth AG]Ribosomal_L11e4v47AG2 A: alpha arraysX: HTHH: HTHT: Ribosomal protein L11, C-terminal domainF: Ribosomal_L11ECOD (1.6)
I [auth AG]Ribosomal_L11_Ne4v47AG1 A: a+b two layersX: Ribosomal protein L11/L12e N-terminal domain-likeH: Ribosomal protein L11/L12e N-terminal domain (From Topology)T: Ribosomal protein L11/L12e N-terminal domainF: Ribosomal_L11_NECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth AH]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
L [auth AJ]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
O [auth AM]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
P [auth AN]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
Q [auth AO]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
R [auth AQ]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
T [auth AS]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
T [auth AS]PF00467KOW motif (KOW)KOW motif- Family
U [auth AT]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
V [auth AU]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
W [auth AW]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
Y [auth AZ]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
Z [auth A1]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
AA [auth A4]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
CA [auth BC]PF07650KH domain (KH_2)KH domain- Domain
CA [auth BC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
C [auth AA]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
C [auth AA]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
DA [auth BD]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
DA [auth BD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
EA [auth BE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
EA [auth BE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
FA [auth BF]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
GA [auth BG]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes.Domain
HA [auth BH]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8- Domain
IA [auth BI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
JA [auth BJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
KA [auth BK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
LA [auth BL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
MA [auth BM]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
D [auth AB]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
PA [auth BP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
RA [auth BR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
SA [auth BS]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19- Domain
TA [auth BT]PF01649Ribosomal protein S20 (Ribosomal_S20p)Ribosomal protein S20- Family
E [auth AC]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth AD]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
F [auth AD]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
H [auth AF]PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domain- Domain
H [auth AF]PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domain- Domain
I [auth AG]PF03946Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N)Ribosomal protein L11, N-terminal domainThe N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain.Domain
I [auth AG]PF00298Ribosomal protein L11, RNA binding domain (Ribosomal_L11)Ribosomal protein L11, RNA binding domain- Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A0]23S ribosomal RNA---
J [auth AH]50S ribosomal protein L13
K [auth AI]50S ribosomal protein L14---
L [auth AJ]50S ribosomal protein L15
M [auth AK]50S ribosomal protein L16---
N [auth AL]50S ribosomal protein L17---
O [auth AM]50S ribosomal protein L18
P [auth AN]50S ribosomal protein L19
Q [auth AO]50S ribosomal protein L20
R [auth AQ]50S ribosomal protein L22
S [auth AR]50S ribosomal protein L23---
B [auth A9]5S ribosomal RNA---
T [auth AS]50S ribosomal protein L24
U [auth AT]50S ribosomal protein L25
V [auth AU]50S ribosomal protein L27
W [auth AW]50S ribosomal protein L29
X [auth AX]50S ribosomal protein L30---
Y [auth AZ]50S ribosomal protein L32
Z [auth A1]50S ribosomal protein L33
AA [auth A4]50S ribosomal protein L36
16S RIBOSOMAL RNA---
CA [auth BC]30S RIBOSOMAL PROTEIN S3
C [auth AA]50S ribosomal protein L2
DA [auth BD]30S RIBOSOMAL PROTEIN S4
EA [auth BE]30S RIBOSOMAL PROTEIN S5
FA [auth BF]30S RIBOSOMAL PROTEIN S6
GA [auth BG]30S RIBOSOMAL PROTEIN S7
HA [auth BH]30S RIBOSOMAL PROTEIN S8
IA [auth BI]30S RIBOSOMAL PROTEIN S9
JA [auth BJ]30S RIBOSOMAL PROTEIN S10
KA [auth BK]30S RIBOSOMAL PROTEIN S11
LA [auth BL]30S RIBOSOMAL PROTEIN S12
MA [auth BM]30S RIBOSOMAL PROTEIN S13
D [auth AB]50S ribosomal protein L3
NA [auth BN]30S RIBOSOMAL PROTEIN S14---
OA [auth BO]30S RIBOSOMAL PROTEIN S15---
PA [auth BP]30S RIBOSOMAL PROTEIN S16
QA [auth BQ]30S RIBOSOMAL PROTEIN S17---
RA [auth BR]30S RIBOSOMAL PROTEIN S18
SA [auth BS]30S RIBOSOMAL PROTEIN S19
TA [auth BT]30S RIBOSOMAL PROTEIN S20
E [auth AC]50S ribosomal protein L4
F [auth AD]50S ribosomal protein L5
G [auth AE]50S ribosomal protein L6---
H [auth AF]50S ribosomal protein L9
I [auth AG]50S ribosomal protein L11

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth AH]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
J [auth AH]IPR005822Large ribosomal subunit protein uL13Family
J [auth AH]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
J [auth AH]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
L [auth AJ]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
L [auth AJ]IPR021131Large ribosomal subunit protein uL15/eL18Domain
L [auth AJ]IPR030878Large ribosomal subunit protein uL15Family
L [auth AJ]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
L [auth AJ]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
O [auth AM]IPR005484Large ribosomal subunit protein uL18Family
O [auth AM]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
P [auth AN]IPR001857Large ribosomal subunit protein bL19Family
P [auth AN]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
P [auth AN]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
P [auth AN]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
Q [auth AO]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
Q [auth AO]IPR005813Large ribosomal subunit protein bL20Family
R [auth AQ]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth AQ]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth AQ]IPR001063Large ribosomal subunit protein uL22Family
R [auth AQ]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth AQ]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
T [auth AS]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth AS]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth AS]IPR003256Large ribosomal subunit protein uL24Family
T [auth AS]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth AS]IPR005824KOWDomain
T [auth AS]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth AT]IPR020055Ribosomal protein bL25, short-formFamily
U [auth AT]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
U [auth AT]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
U [auth AT]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
V [auth AU]IPR001684Large ribosomal subunit protein bL27Family
V [auth AU]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
W [auth AW]IPR001854Large ribosomal subunit protein uL29Family
W [auth AW]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
W [auth AW]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
Y [auth AZ]IPR002677Large ribosomal subunit protein bL32Family
Y [auth AZ]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Y [auth AZ]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
Z [auth A1]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
Z [auth A1]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
Z [auth A1]IPR001705Large ribosomal subunit protein bL33Family
Z [auth A1]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
AA [auth A4]IPR000473Large ribosomal subunit protein bL36Family
AA [auth A4]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
CA [auth BC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
CA [auth BC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
CA [auth BC]IPR004087K Homology domainDomain
CA [auth BC]IPR004044K Homology domain, type 2Domain
CA [auth BC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
CA [auth BC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
CA [auth BC]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
CA [auth BC]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
C [auth AA]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth AA]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth AA]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth AA]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth AA]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
C [auth AA]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth AA]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth AA]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth AA]IPR002171Large ribosomal subunit protein uL2Family
DA [auth BD]IPR002942RNA-binding S4 domainDomain
DA [auth BD]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
DA [auth BD]IPR022801Small ribosomal subunit protein uS4Family
DA [auth BD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
DA [auth BD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
DA [auth BD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
EA [auth BE]IPR000851Small ribosomal subunit protein uS5Family
EA [auth BE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
EA [auth BE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
EA [auth BE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
EA [auth BE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
EA [auth BE]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
EA [auth BE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
FA [auth BF]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
FA [auth BF]IPR000529Small ribosomal subunit protein bS6Family
FA [auth BF]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
FA [auth BF]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
FA [auth BF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
GA [auth BG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
GA [auth BG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
GA [auth BG]IPR000235Small ribosomal subunit protein uS7Family
GA [auth BG]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
GA [auth BG]IPR023798Small ribosomal subunit protein uS7 domainDomain
HA [auth BH]IPR000630Small ribosomal subunit protein uS8Family
HA [auth BH]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
HA [auth BH]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
IA [auth BI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
IA [auth BI]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
IA [auth BI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
IA [auth BI]IPR000754Small ribosomal subunit protein uS9Family
IA [auth BI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
JA [auth BJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
JA [auth BJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
JA [auth BJ]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
JA [auth BJ]IPR001848Small ribosomal subunit protein uS10Family
KA [auth BK]IPR001971Small ribosomal subunit protein uS11Family
KA [auth BK]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
KA [auth BK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
KA [auth BK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
LA [auth BL]IPR005679Ribosomal protein uS12, bacterial-typeFamily
LA [auth BL]IPR006032Small ribosomal subunit protein uS12Family
LA [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
MA [auth BM]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
MA [auth BM]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
MA [auth BM]IPR001892Small ribosomal subunit protein uS13Family
MA [auth BM]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
MA [auth BM]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
D [auth AB]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth AB]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth AB]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth AB]IPR000597Large ribosomal subunit protein uL3Family
PA [auth BP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
PA [auth BP]IPR000307Small ribosomal subunit protein bS16Family
PA [auth BP]IPR020592Small ribosomal subunit protein bS16, conserved siteConserved Site
RA [auth BR]IPR001648Small ribosomal subunit protein bS18Family
RA [auth BR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
RA [auth BR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
SA [auth BS]IPR002222Small ribosomal subunit protein uS19Family
SA [auth BS]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
SA [auth BS]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
SA [auth BS]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
TA [auth BT]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
TA [auth BT]IPR002583Small ribosomal subunit protein bS20Family
E [auth AC]IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth AC]IPR002136Large ribosomal subunit protein uL4Family
E [auth AC]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth AD]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth AD]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth AD]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth AD]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth AD]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
F [auth AD]IPR002132Large ribosomal subunit protein uL5Family
H [auth AF]IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth AF]IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth AF]IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth AF]IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth AF]IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
H [auth AF]IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth AF]IPR000244Large ribosomal subunit protein bL9Family
I [auth AG]IPR020785Large ribosomal subunit protein uL11, conserved siteConserved Site
I [auth AG]IPR020783Large ribosomal subunit protein uL11, C-terminalDomain
I [auth AG]IPR000911Ribosomal protein uL11Family
I [auth AG]IPR006519Large ribosomal subunit protein uL11, bacterial-typeFamily
I [auth AG]IPR020784Large ribosomal subunit protein uL11, N-terminalDomain
I [auth AG]IPR036769Large ribosomal subunit protein uL11, C-terminal domain superfamilyHomologous Superfamily
I [auth AG]IPR036796Large ribosomal subunit protein uL11, N-terminal domain superfamilyHomologous Superfamily