6IV6 | pdb_00006iv6

Cryo-EM structure of AcrVA5-acetylated MbCas12a in complex with crRNA

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	cas_Cpf1_4th	e6iv6A7	A: beta barrels	X: OB-fold	H: Small protein B (SmpB) (From Topology)	T: Small protein B (SmpB)	F: cas_Cpf1_4th	ECOD (1.6)
A	UNK_F_TYPE	e6iv6A1	A: beta barrels	X: OB-fold	H: Small protein B (SmpB) (From Topology)	T: Small protein B (SmpB)	F: UNK_F_TYPE	ECOD (1.6)
A	cas_Cpf1_3rd	e6iv6A6	A: alpha arrays	X: CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain (From Topology)	H: CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain (From Topology)	T: CRISPR-associated endonuclease Cpf1 PI (PAM-interacting) domain	F: cas_Cpf1_3rd	ECOD (1.6)
A	cas_Cpf1_1st	e6iv6A3	A: alpha complex topology	X: CRISPR-associated endonuclease first helical domain	H: CRISPR-associated endonuclease Cpf1 first helical domain (From Topology)	T: CRISPR-associated endonuclease Cpf1 first helical domain	F: cas_Cpf1_1st	ECOD (1.6)
A	cas_Cpf1_2nd	e6iv6A5	A: alpha complex topology	X: CRISPR-associated endonuclease Cpf1 second helical domain (From Topology)	H: CRISPR-associated endonuclease Cpf1 second helical domain (From Topology)	T: CRISPR-associated endonuclease Cpf1 second helical domain	F: cas_Cpf1_2nd	ECOD (1.6)
A	cas_Cpf1_5th	e6iv6A2	A: mixed a+b and a/b	X: Ribonuclease H-like	H: Ribonuclease H-like (From Topology)	T: Ribonuclease H-like	F: cas_Cpf1_5th	ECOD (1.6)
A	cas_Cpf1_6th	e6iv6A4	A: few secondary structure elements	X: CRISPR-associated endonuclease Cpf1 nuclease domain (From Topology)	H: CRISPR-associated endonuclease Cpf1 nuclease domain (From Topology)	T: CRISPR-associated endonuclease Cpf1 nuclease domain	F: cas_Cpf1_6th	ECOD (1.6)

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A	ALY	Parent Component: LYS RESID: AA0055 PSI-MOD : N6-acetyl-L-lysine MOD:00064

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.