Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
DSCOP2B SuperfamilyTranslational proteins8089142 3000811 SCOP2B (2022-06-29)
ESCOP2B SuperfamilyRibosomal protein L48080694 3001146 SCOP2B (2022-06-29)
F [auth J]SCOP2B SuperfamilyRibosomal protein L138066055 3001134 SCOP2B (2022-06-29)
G [auth K]SCOP2B Superfamily50S Ribosomal protein L14-like8072020 3000433 SCOP2B (2022-06-29)
H [auth L]SCOP2B SuperfamilyRibosomal proteins L15p and L18e8070559 3001045 SCOP2B (2022-06-29)
I [auth N]SCOP2B SuperfamilyProkaryotic ribosomal protein L178089014 3000995 SCOP2B (2022-06-29)
L [auth Q]SCOP2B SuperfamilyRibosomal protein L208075004 3000563 SCOP2B (2022-06-29)
M [auth R]SCOP2B Superfamilyl21p-like8082437 3002005 SCOP2B (2022-06-29)
N [auth S]SCOP2B SuperfamilyRibosomal protein L228076724 3001078 SCOP2B (2022-06-29)
O [auth T]SCOP2B SuperfamilyRibosomal proteins S24e L23 and L15e8077095 3000210 SCOP2B (2022-06-29)
P [auth U]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082505 3000334 SCOP2B (2022-06-29)
Q [auth V]SCOP2B SuperfamilyRibosomal L27 protein-like8075028 3000539 SCOP2B (2022-06-29)
R [auth Z]SCOP2B SuperfamilyRibosomal protein L30p/L7e8076285 3001378 SCOP2B (2022-06-29)
S [auth b]SCOP2B SuperfamilyZn-binding ribosomal proteins8081585 3001320 SCOP2B (2022-06-29)
K [auth P]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain8082419 3000334 SCOP2B (2022-06-29)
T [auth Y]SCOP2B SuperfamilyRibosomal protein L29 (L29p)8076730 3000713 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
CPF00181e6ppfC2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: PF00181ECOD (1.6)
CPF03947e6ppfC1 A: beta barrelsX: SH3H: SH3T: SH3F: PF03947ECOD (1.6)
DF_UNCLASSIFIEDe6ppfD1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: F_UNCLASSIFIEDECOD (1.6)
EPF00573e6ppfE1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: PF00573ECOD (1.6)
F [auth J]PF00572e6ppfJ1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: PF00572ECOD (1.6)
G [auth K]PF00238e6ppfK1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: PF00238ECOD (1.6)
H [auth L]PF00828e6ppfL1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: PF00828ECOD (1.6)
I [auth N]PF01196e6ppfN1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: PF01196ECOD (1.6)
J [auth O]PF00861e6ppfO1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00861ECOD (1.6)
L [auth Q]PF00453e6ppfQ1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: PF00453ECOD (1.6)
M [auth R]PF00829e6ppfR1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: PF00829ECOD (1.6)
N [auth S]PF00237e6ppfS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: PF00237ECOD (1.6)
O [auth T]PF00276e6ppfT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: PF00276ECOD (1.6)
P [auth U]PF00467,PF17136e6ppfU1 A: beta barrelsX: SH3H: SH3T: SH3F: PF00467,PF17136ECOD (1.6)
Q [auth V]PF01016e6ppfV1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: PF01016ECOD (1.6)
R [auth Z]PF00327e6ppfZ1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: PF00327ECOD (1.6)
S [auth b]PF01783e6ppfb1 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: PF01783ECOD (1.6)
U [auth d]PF00468e6ppfd1 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: PF00468ECOD (1.6)
K [auth P]PF01245e6ppfP1 A: beta barrelsX: SH3H: SH3T: SH3F: PF01245ECOD (1.6)
T [auth Y]PF00831e6ppfY1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: PF00831ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth J]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
G [auth K]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
H [auth L]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
I [auth N]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
J [auth O]PF00861Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p)Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast- Family
L [auth Q]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
M [auth R]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
N [auth S]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
O [auth T]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
P [auth U]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
P [auth U]PF00467KOW motif (KOW)KOW motif- Family
Q [auth V]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
R [auth Z]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
S [auth b]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
U [auth d]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
K [auth P]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
T [auth Y]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
23S rRNA---
5S rRNA---
50S ribosomal protein L2
50S ribosomal protein L3
50S ribosomal protein L4
F [auth J]50S ribosomal protein L13
G [auth K]50S ribosomal protein L14
H [auth L]50S ribosomal protein L15
I [auth N]50S ribosomal protein L17
J [auth O]50S ribosomal protein L18
L [auth Q]50S ribosomal protein L20
M [auth R]50S ribosomal protein L21
N [auth S]50S ribosomal protein L22
O [auth T]50S ribosomal protein L23
P [auth U]50S ribosomal protein L24
Q [auth V]50S ribosomal protein L27
R [auth Z]50S ribosomal protein L30
S [auth b]50S ribosomal protein L32
U [auth d]50S ribosomal protein L34
K [auth P]50S ribosomal protein L19
T [auth Y]50S ribosomal protein L29

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
IPR002171Large ribosomal subunit protein uL2Family
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
IPR000597Large ribosomal subunit protein uL3Family
IPR013005Large ribosomal subunit protein uL4-likeFamily
IPR002136Large ribosomal subunit protein uL4Family
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
F [auth J]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
F [auth J]IPR005822Large ribosomal subunit protein uL13Family
F [auth J]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
F [auth J]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
G [auth K]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
G [auth K]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
G [auth K]IPR000218Large ribosomal subunit protein uL14Family
G [auth K]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
H [auth L]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
H [auth L]IPR021131Large ribosomal subunit protein uL15/eL18Domain
H [auth L]IPR030878Large ribosomal subunit protein uL15Family
H [auth L]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
H [auth L]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
I [auth N]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
I [auth N]IPR047859Large ribosomal subunit protein bL17, conserved siteConserved Site
I [auth N]IPR000456Large ribosomal subunit protein bL17Family
J [auth O]IPR005484Large ribosomal subunit protein uL18Family
J [auth O]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
L [auth Q]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
L [auth Q]IPR005813Large ribosomal subunit protein bL20Family
M [auth R]IPR028909Large ribosomal subunit protein bL21-likeFamily
M [auth R]IPR001787Large ribosomal subunit protein bL21Family
M [auth R]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
M [auth R]IPR018258Large ribosomal subunit protein bL21, conserved siteConserved Site
N [auth S]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
N [auth S]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
N [auth S]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
N [auth S]IPR001063Large ribosomal subunit protein uL22Family
N [auth S]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
O [auth T]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
O [auth T]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
O [auth T]IPR001014Large ribosomal subunit protein uL23, conserved siteConserved Site
O [auth T]IPR013025Large ribosomal subunit protein uL23-likeFamily
P [auth U]IPR003256Large ribosomal subunit protein uL24Family
P [auth U]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
P [auth U]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
P [auth U]IPR005824KOWDomain
P [auth U]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth U]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
Q [auth V]IPR001684Large ribosomal subunit protein bL27Family
Q [auth V]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
R [auth Z]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
R [auth Z]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
R [auth Z]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
R [auth Z]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
S [auth b]IPR002677Large ribosomal subunit protein bL32Family
S [auth b]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
S [auth b]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
U [auth d]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
U [auth d]IPR000271Large ribosomal subunit protein bL34Family
K [auth P]IPR001857Large ribosomal subunit protein bL19Family
K [auth P]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
K [auth P]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
K [auth P]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth Y]IPR001854Large ribosomal subunit protein uL29Family
T [auth Y]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
T [auth Y]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site