GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 1MEZ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 1MEZ_GDP_A_1452 | 70% | 53% | 0.147 | 0.966 | 1.02 | 0.82 | 2 | 1 | 0 | 0 | 100% | 1 |
| 2DGN_GDP_A_1452 | 86% | 54% | 0.111 | 0.981 | 0.94 | 0.86 | 2 | 2 | 0 | 0 | 100% | 1 |
| 1LNY_GDP_B_1454 | 82% | 53% | 0.107 | 0.961 | 1.01 | 0.8 | 2 | 2 | 3 | 0 | 100% | 1 |
| 1MF0_GDP_A_1452 | 79% | 53% | 0.13 | 0.976 | 0.92 | 0.91 | 2 | 2 | 1 | 0 | 100% | 1 |
| 1LON_GDP_A_1453 | 77% | 55% | 0.126 | 0.966 | 0.92 | 0.81 | 2 | 1 | 1 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
