SOG: octyl 1-thio-beta-D-glucopyranoside
SOG is a Ligand Of Interest in 2VT4 designated by the RCSB
| Best-fitted instance in this entry | |
| Other instances in this entry |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry | |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2VT4_SOG_A_403 | 73% | 60% | 0.102 | 0.929 | 0.59 | 0.92 | - | - | 0 | 0 | 100% | 1 |
| 2VT4_SOG_D_403 | 58% | 25% | 0.123 | 0.901 | 0.63 | 2.36 | - | 7 | 4 | 0 | 100% | 1 |
| 2VT4_SOG_B_402 | 46% | 27% | 0.145 | 0.879 | 0.94 | 1.98 | 1 | 4 | 0 | 0 | 100% | 1 |
| 2VT4_SOG_D_402 | 45% | 30% | 0.155 | 0.886 | 1.26 | 1.54 | 3 | 2 | 0 | 0 | 100% | 1 |
| 2VT4_SOG_C_402 | 43% | 37% | 0.141 | 0.864 | 0.74 | 1.72 | 1 | 3 | 1 | 0 | 100% | 1 |
| 2VT4_SOG_A_402 | 39% | 10% | 0.162 | 0.868 | 1.97 | 2.35 | 6 | 8 | 3 | 0 | 100% | 1 |
| 2VT4_SOG_C_404 | 32% | 47% | 0.172 | 0.847 | 0.93 | 1.1 | 1 | 3 | 2 | 0 | 100% | 1 |
| 2VT4_SOG_A_405 | 28% | 44% | 0.175 | 0.827 | 1.06 | 1.12 | 2 | 3 | 6 | 0 | 100% | 1 |
| 2VT4_SOG_B_404 | 21% | 54% | 0.152 | 0.853 | 0.61 | 1.15 | - | 1 | 2 | 0 | 50% | 1 |
| 2VT4_SOG_C_405 | 20% | 47% | 0.174 | 0.771 | 0.68 | 1.34 | - | 3 | 8 | 0 | 100% | 1 |
| 2VT4_SOG_D_405 | 14% | 59% | 0.179 | 0.73 | 0.56 | 1 | - | - | 6 | 0 | 100% | 1 |
| 2VT4_SOG_B_405 | 11% | 57% | 0.186 | 0.701 | 0.82 | 0.83 | 2 | 1 | 3 | 0 | 100% | 1 |
| 2YCY_SOG_A_1360 | 58% | 52% | 0.105 | 0.881 | 0.63 | 1.2 | - | 2 | 3 | 0 | 100% | 1 |
| 2YCX_SOG_B_1362 | 25% | 31% | 0.212 | 0.847 | 1.39 | 1.34 | 2 | 3 | 1 | 0 | 100% | 1 |
| 2YCZ_SOG_B_1360 | 2% | 40% | 0.43 | 0.672 | 1.25 | 1.08 | 2 | 2 | 0 | 0 | 100% | 1 |
| 6TOD_SOG_B_406 | 67% | 43% | 0.106 | 0.913 | 1.05 | 1.17 | 2 | 1 | 0 | 0 | 100% | 1 |
| 6YU6_SOG_A_507 | 64% | 91% | 0.138 | 0.937 | 0.18 | 0.39 | - | - | 3 | 0 | 100% | 1 |
| 6TP6_SOG_A_405 | 61% | 75% | 0.145 | 0.934 | 0.36 | 0.62 | - | - | 0 | 0 | 100% | 1 |
| 6TOT_SOG_A_405 | 55% | 44% | 0.159 | 0.929 | 0.91 | 1.24 | 1 | 1 | 0 | 0 | 100% | 1 |
