GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 3D6T designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 3D6T_GDP_B_1 | 96% | 25% | 0.063 | 0.97 | 1.07 | 1.95 | 1 | 8 | 0 | 0 | 100% | 1 |
| 2ZEJ_GDP_A_1 | 97% | 37% | 0.06 | 0.974 | 0.95 | 1.49 | 1 | 5 | 0 | 0 | 100% | 1 |
| 6OJE_GDP_B_1602 | 91% | 51% | 0.096 | 0.984 | 0.77 | 1.1 | - | 3 | 0 | 0 | 100% | 1 |
| 9C76_GDP_B_201 | 91% | 53% | 0.073 | 0.96 | 1.06 | 0.77 | 2 | - | 0 | 0 | 100% | 1 |
| 6XAF_GDP_A_1602 | 88% | 5% | 0.1 | 0.975 | 3.89 | 1.64 | 14 | 7 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
