Ligand validation:4DCT

GDP: GUANOSINE-5'-DIPHOSPHATE

GDP is a Ligand Of Interest in 4DCT designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4DCT_GDP_A_501	71%	41%	0.115	0.936	0.92	1.35	-	6	2	0	100%	1
4DCT_GDP_A_502	8%	41%	0.395	0.88	0.93	1.35	1	4	10	0	100%	0.5
5X4B_GDP_B_201	99%	17%	0.051	0.99	1.25	2.35	2	6	0	0	100%	1
4DCS_GDP_A_501	86%	46%	0.09	0.96	0.99	1.1	2	3	0	0	100%	1
4DCU_GDP_A_501	85%	45%	0.111	0.975	0.94	1.17	1	3	0	0	100%	1
2HJG_GDP_A_500	79%	50%	0.083	0.929	0.98	0.95	1	2	1	0	100%	1
5MBS_GDP_A_501	45%	41%	0.206	0.938	0.99	1.3	1	3	0	0	100%	0.804
1TVK_GDP_B_1500	100%	23%	0.012	0.999	2.28	0.95	3	2	8	0	100%	1
9BL0_GDP_A_201	100%	46%	0.016	0.998	0.96	1.11	1	2	1	0	100%	1
8QEG_GDP_A_401	100%	51%	0.031	0.993	1.02	0.87	3	1	0	0	100%	1
8QEH_GDP_A_405	100%	55%	0.03	0.993	0.89	0.85	1	1	0	0	100%	1
9BAJ_GDP_A_203	100%	41%	0.032	0.994	1.22	1.1	2	2	1	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.