4V62 | pdb_00004v62

SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL

SQD is a Ligand Of Interest in 4V62 designated by the RCSB

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with same target (top 5)

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
4V62_SQD_BB_601	23%	5%	0.231	0.879	2.57	2.68	22	16	2	0	87%	1
4V62_SQD_AA_412	19%	6%	0.23	0.836	2.39	2.78	24	19	5	0	94%	1
4V62_SQD_BL_101	16%	5%	0.246	0.842	2.63	2.69	22	15	2	0	87%	1
4V62_SQD_AA_415	15%	6%	0.273	0.837	2.5	2.68	26	20	5	0	100%	1
4V62_SQD_BA_413	14%	6%	0.248	0.805	2.42	2.73	22	19	4	0	94%	1
4V62_SQD_AD_409	13%	4%	0.241	0.821	2.69	2.97	19	15	2	0	80%	1
4V62_SQD_BD_409	11%	4%	0.247	0.8	2.66	2.96	19	15	2	0	80%	1
4V62_SQD_BA_401	5%	5%	0.342	0.755	2.55	2.71	28	22	2	0	100%	1
4V62_SQD_AF_101	3%	5%	0.356	0.722	2.46	2.85	20	19	2	0	83%	1
4V62_SQD_BF_101	2%	5%	0.375	0.654	2.54	2.82	19	18	1	0	83%	1
5V2C_SQD_a_413	94%	21%	0.075	0.976	1.12	2.14	4	12	0	0	100%	1
5GTI_SQD_A_409	91%	29%	0.066	0.95	0.98	1.84	3	13	0	0	100%	1
5WS6_SQD_A_411	87%	32%	0.084	0.954	0.88	1.78	2	12	0	0	100%	1
5B66_SQD_a_409	79%	23%	0.091	0.936	1.01	2.11	4	11	0	0	100%	1
3WU2_SQD_A_412	78%	25%	0.089	0.932	0.86	2.15	2	17	5	0	100%	1
6W1V_SQD_A_409	78%	25%	0.089	0.937	1.02	2.02	4	16	0	0	96%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.