UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 5BJX designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5BJX_UDP_A_701 | 98% | 35% | 0.061 | 0.985 | 1.16 | 1.39 | 3 | 5 | 1 | 0 | 100% | 1 |
| 5BJX_UDP_B_701 | 95% | 39% | 0.077 | 0.979 | 1 | 1.39 | 1 | 5 | 0 | 0 | 100% | 1 |
| 5BJY_UDP_A_701 | 98% | 34% | 0.058 | 0.983 | 1.07 | 1.53 | - | 5 | 0 | 0 | 100% | 1 |
| 5BJW_UDP_B_702 | 94% | 35% | 0.076 | 0.974 | 1.04 | 1.52 | 1 | 5 | 0 | 0 | 100% | 1 |
| 5BJU_UDP_A_701 | 83% | 38% | 0.101 | 0.961 | 0.93 | 1.47 | - | 6 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_B_401 | 100% | 3% | 0.012 | 0.999 | 3.31 | 2.68 | 13 | 13 | 2 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 3H4T_UDP_A_604 | 100% | 42% | 0.039 | 0.99 | 1.01 | 1.22 | 2 | 3 | 0 | 0 | 100% | 1 |
