SQD: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL
SQD is a Ligand Of Interest in 5GTI designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5GTI_SQD_A_409 | 60% | 32% | 0.157 | 0.945 | 0.98 | 1.84 | 3 | 13 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_a_411 | 49% | 36% | 0.187 | 0.934 | 0.98 | 1.6 | 3 | 11 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_a_413 | 33% | 42% | 0.217 | 0.894 | 1.09 | 1.23 | 4 | 8 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_A_411 | 20% | 45% | 0.251 | 0.85 | 1.03 | 1.11 | 3 | 4 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_B_621 | 16% | 38% | 0.244 | 0.816 | 1.04 | 1.45 | 3 | 8 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_D_413 | 15% | 33% | 0.299 | 0.898 | 1.14 | 1.63 | 3 | 12 | 0 | 0 | 80% | 0.7963 |
| 5GTI_SQD_L_102 | 12% | 37% | 0.263 | 0.789 | 1.03 | 1.53 | 3 | 10 | 0 | 0 | 100% | 1 |
| 5GTI_SQD_f_101 | 6% | 34% | 0.319 | 0.783 | 1.18 | 1.53 | 3 | 8 | 0 | 0 | 80% | 0.7963 |
| 5V2C_SQD_a_413 | 94% | 24% | 0.075 | 0.976 | 1.12 | 2.14 | 4 | 12 | 0 | 0 | 100% | 1 |
| 6DHE_SQD_A_412 | 77% | 23% | 0.113 | 0.961 | 1.05 | 2.27 | 5 | 14 | 0 | 0 | 96% | 0.963 |
| 8IRC_SQD_a_411 | 77% | 32% | 0.119 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IR5_SQD_a_411 | 75% | 33% | 0.123 | 0.958 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 1 |
| 8IRF_SQD_a_410 | 75% | 32% | 0.125 | 0.96 | 0.96 | 1.83 | 3 | 13 | 0 | 0 | 100% | 0.49 |
| 8IR8_SQD_a_409 | 75% | 33% | 0.126 | 0.96 | 0.95 | 1.77 | 3 | 13 | 0 | 0 | 100% | 0.4 |
