Ligand validation:5HL7

SPD: SPERMIDINE

	Best-fitted instance in this entry
	Other instances in this entry

	Best-fitted instance in this entry
	Best-fitted PDB instances with different target (top 5)

Identifier	Ranking for goodness of fit	Ranking for geometry	Real space R factor	Real space correlation coefficient	RMSZ-bond-length	RMSZ-bond-angle	Outliers of bond length	Outliers of bond angle	Atomic clashes	Stereochemical errors	Model completeness	Average occupancy
5HL7_SPD_X_3497	31%	93%	0.185	0.852	0.12	0.34	-	-	5	0	100%	1
5HL7_SPD_X_3495	24%	90%	0.237	0.868	0.24	0.36	-	-	3	0	100%	1
5HL7_SPD_X_3493	22%	79%	0.273	0.888	0.33	0.53	-	-	2	0	100%	1
5HL7_SPD_X_3494	19%	92%	0.269	0.863	0.21	0.31	-	-	1	0	100%	1
5HL7_SPD_X_3492	16%	83%	0.273	0.846	0.39	0.39	-	-	0	0	100%	1
5HL7_SPD_Y_213	5%	97%	0.379	0.783	0.2	0.13	-	-	1	0	100%	1
5HL7_SPD_X_3496	3%	94%	0.483	0.806	0.27	0.19	-	-	0	0	100%	1
5HL7_SPD_X_3498	2%	74%	0.405	0.692	0.38	0.61	-	-	1	0	100%	1
3C6K_SPD_A_501	100%	56%	0.031	0.993	0.37	1.31	-	1	1	0	100%	1
4C0Z_SPD_A_1223	95%	63%	0.064	0.966	0.7	0.73	-	-	3	0	100%	1
5JC9_SPD_DA_3190	92%	97%	0.089	0.979	0.12	0.19	-	-	0	0	100%	1
5J7L_SPD_DA_3187	90%	92%	0.094	0.978	0.19	0.33	-	-	0	0	100%	1
7XJM_SPD_B_401	90%	91%	0.078	0.961	0.25	0.33	-	-	0	0	100%	1

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.