GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 5KX6 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5KX6_GDP_B_601 | 28% | 47% | 0.196 | 0.847 | 0.79 | 1.23 | - | 4 | 0 | 0 | 100% | 1 |
| 5KX6_GDP_A_601 | 6% | 42% | 0.273 | 0.715 | 0.88 | 1.37 | 1 | 4 | 0 | 0 | 100% | 0.7 |
| 5KOR_GDP_D_601 | 75% | 41% | 0.115 | 0.947 | 1.25 | 1.03 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5KWK_GDP_B_601 | 60% | 41% | 0.118 | 0.902 | 0.85 | 1.45 | - | 6 | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 8QEG_GDP_A_401 | 100% | 51% | 0.031 | 0.993 | 1.02 | 0.87 | 3 | 1 | 0 | 0 | 100% | 1 |
| 8QEH_GDP_A_405 | 100% | 55% | 0.03 | 0.993 | 0.89 | 0.85 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9BAJ_GDP_A_203 | 100% | 41% | 0.032 | 0.994 | 1.22 | 1.1 | 2 | 2 | 1 | 0 | 100% | 1 |
