PGV: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE
PGV is a Ligand Of Interest in 5W97 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 5W97_PGV_A_607 | 56% | 56% | 0.207 | 0.979 | 0.73 | 0.94 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5W97_PGV_c_301 | 54% | 57% | 0.206 | 0.973 | 0.79 | 0.85 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5W97_PGV_C_303 | 42% | 54% | 0.233 | 0.955 | 0.87 | 0.91 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5W97_PGV_c_304 | 41% | 49% | 0.241 | 0.958 | 0.9 | 1.05 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5W97_PGV_C_304 | 24% | 41% | 0.199 | 0.829 | 1.14 | 1.14 | 2 | 3 | 0 | 0 | 100% | 1 |
| 5W97_PGV_G_103 | 17% | 47% | 0.209 | 0.784 | 1.08 | 0.98 | 2 | 4 | 0 | 0 | 100% | 1 |
| 5W97_PGV_A_606 | 8% | 36% | 0.258 | 0.726 | 1.25 | 1.28 | 3 | 8 | 0 | 0 | 100% | 1 |
| 5W97_PGV_a_607 | 7% | 47% | 0.287 | 0.739 | 1.08 | 0.96 | 2 | 3 | 0 | 0 | 100% | 1 |
| 9IKG_PGV_A_614 | 96% | 53% | 0.073 | 0.982 | 0.74 | 1.06 | 2 | 2 | 0 | 0 | 100% | 1 |
| 5B1B_PGV_C_302 | 94% | 56% | 0.078 | 0.979 | 0.81 | 0.87 | 1 | 1 | 3 | 0 | 100% | 1 |
| 7YPY_PGV_P_302 | 94% | 54% | 0.079 | 0.978 | 0.79 | 0.99 | 2 | 2 | 1 | 0 | 100% | 1 |
| 9IKH_PGV_C_303 | 94% | 53% | 0.08 | 0.979 | 0.77 | 1.06 | - | 3 | 1 | 0 | 100% | 1 |
| 9KUM_PGV_P_304 | 94% | 50% | 0.08 | 0.978 | 0.92 | 1.01 | 4 | 4 | 1 | 0 | 100% | 1 |
| 9IKF_PGV_P_304 | 93% | 54% | 0.084 | 0.979 | 0.87 | 0.92 | 2 | 3 | 0 | 0 | 100% | 1 |
