UDP: URIDINE-5'-DIPHOSPHATE
UDP is a Ligand Of Interest in 6BK3 designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6BK3_UDP_A_501 | 43% | 28% | 0.179 | 0.904 | 1.14 | 1.75 | 2 | 9 | 2 | 0 | 100% | 1 |
| 6BK2_UDP_A_501 | 98% | 28% | 0.06 | 0.983 | 1.29 | 1.61 | 5 | 8 | 0 | 0 | 100% | 1 |
| 6BK0_UDP_A_501 | 93% | 16% | 0.078 | 0.971 | 1.55 | 2.1 | 3 | 9 | 2 | 0 | 100% | 1 |
| 5TMB_UDP_A_501 | 77% | 36% | 0.137 | 0.978 | 0.92 | 1.56 | - | 5 | 0 | 0 | 100% | 1 |
| 6BK1_UDP_A_501 | 47% | 4% | 0.156 | 0.896 | 1.89 | 3.82 | 7 | 15 | 2 | 0 | 100% | 1 |
| 5TME_UDP_A_501 | 36% | 17% | 0.184 | 0.875 | 1.87 | 1.76 | 6 | 6 | 0 | 0 | 100% | 1 |
| 8X3Q_UDP_C_401 | 100% | 3% | 0.015 | 0.998 | 3.32 | 2.69 | 13 | 13 | 0 | 0 | 100% | 1 |
| 8X3U_UDP_A_401 | 100% | 3% | 0.015 | 0.998 | 3.4 | 2.69 | 14 | 11 | 0 | 0 | 100% | 1 |
| 8VH8_UDP_C_704 | 100% | 62% | 0.032 | 0.995 | 0.55 | 0.9 | - | 1 | 0 | 0 | 100% | 1 |
| 2B69_UDP_A_900 | 100% | 42% | 0.032 | 0.992 | 1.03 | 1.21 | 2 | 4 | 0 | 0 | 100% | 1 |
| 3H4T_UDP_A_604 | 100% | 42% | 0.039 | 0.99 | 1.01 | 1.22 | 2 | 3 | 0 | 0 | 100% | 1 |
