GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6DJQ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6DJQ_GDP_B_1001 | 72% | 58% | 0.163 | 0.988 | 1 | 0.63 | 3 | - | 0 | 0 | 100% | 1 |
| 6DJQ_GDP_D_1001 | 67% | 60% | 0.172 | 0.983 | 0.97 | 0.58 | 3 | - | 0 | 0 | 100% | 1 |
| 6DJQ_GDP_C_1001 | 66% | 66% | 0.175 | 0.981 | 0.84 | 0.49 | 3 | - | 0 | 0 | 100% | 1 |
| 6DJQ_GDP_A_1001 | 62% | 64% | 0.192 | 0.985 | 0.89 | 0.49 | 3 | - | 0 | 0 | 100% | 1 |
| 6DI7_GDP_A_1001 | 81% | 64% | 0.133 | 0.985 | 0.81 | 0.57 | - | - | 0 | 0 | 100% | 1 |
| 1TVK_GDP_B_1500 | 100% | 23% | 0.012 | 0.999 | 2.28 | 0.95 | 3 | 2 | 8 | 0 | 100% | 1 |
| 9BL0_GDP_A_201 | 100% | 46% | 0.016 | 0.998 | 0.96 | 1.11 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3K_GDP_A_201 | 100% | 39% | 0.016 | 0.998 | 1.17 | 1.21 | 1 | 2 | 1 | 0 | 100% | 1 |
| 9C3L_GDP_A_201 | 100% | 49% | 0.021 | 0.997 | 0.91 | 1.04 | 1 | 1 | 0 | 0 | 100% | 1 |
| 9C3N_GDP_A_202 | 100% | 38% | 0.017 | 0.998 | 1.36 | 1.06 | 3 | 1 | 0 | 0 | 100% | 1 |
