GDP: GUANOSINE-5'-DIPHOSPHATE
GDP is a Ligand Of Interest in 6MZE designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 6MZE_GDP_D_600 | 41% | 48% | 0.23 | 0.949 | 0.93 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_R_600 | 41% | 47% | 0.238 | 0.954 | 0.93 | 1.13 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_Y_600 | 36% | 48% | 0.223 | 0.919 | 0.95 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_W_600 | 36% | 48% | 0.221 | 0.915 | 0.92 | 1.08 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_K_600 | 30% | 48% | 0.211 | 0.874 | 0.94 | 1.09 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_P_600 | 29% | 47% | 0.25 | 0.909 | 0.92 | 1.12 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_I_600 | 27% | 48% | 0.251 | 0.897 | 0.93 | 1.1 | 1 | 3 | 0 | 0 | 100% | 1 |
| 6MZE_GDP_B_600 | 19% | 48% | 0.311 | 0.907 | 0.93 | 1.11 | 1 | 3 | 0 | 0 | 100% | 1 |
| 1RRG_GDP_A_183 | 100% | 19% | 0.036 | 0.997 | 2.05 | 1.56 | 7 | 3 | 0 | 0 | 100% | 1 |
| 5YMX_GDP_A_301 | 100% | 54% | 0.038 | 0.994 | 0.92 | 0.85 | 1 | - | 2 | 0 | 100% | 1 |
| 8CNJ_GDP_B_201 | 100% | 56% | 0.04 | 0.992 | 0.91 | 0.77 | 1 | - | 0 | 0 | 100% | 1 |
| 5UQW_GDP_A_1002 | 100% | 47% | 0.04 | 0.99 | 1.04 | 1.01 | 2 | 2 | 0 | 0 | 100% | 1 |
| 2PHN_GDP_A_2696 | 100% | 45% | 0.046 | 0.99 | 1.08 | 1.08 | 1 | 2 | 0 | 0 | 100% | 1 |
